| The transcriptional landscape of the mammalian genome P Carninci, T Kasukawa, S Katayama, J Gough, MC Frith, N Maeda, ... science 309 (5740), 1559-1563, 2005 | 4075 | 2005 |
| Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs RIKEN Genome Exploration Research Group Phase I Team: Carninci P. 2 Hayatsu ... Nature 420 (6915), 563-573, 2002 | 2122 | 2002 |
| Antisense transcription in the mammalian transcriptome S Katayama, Y Tomaru, T Kasukawa, K Waki, M Nakanishi, M Nakamura, ... Science 309 (5740), 1564-1566, 2005 | 2046 | 2005 |
| A promoter-level mammalian expression atlas Nature 507 (7493), 462-470, 2014 | 1693 | 2014 |
| Genome-wide analysis of mammalian promoter architecture and evolution P Carninci, A Sandelin, B Lenhard, S Katayama, K Shimokawa, ... Nature genetics 38 (6), 626-635, 2006 | 1598 | 2006 |
| An atlas of human long non-coding RNAs with accurate 5′ ends CC Hon, JA Ramilowski, J Harshbarger, N Bertin, OJL Rackham, J Gough, ... Nature 543 (7644), 199-204, 2017 | 1001 | 2017 |
| Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage T Shiraki, S Kondo, S Katayama, K Waki, T Kasukawa, H Kawaji, ... Proceedings of the National Academy of Sciences 100 (26), 15776-15781, 2003 | 957 | 2003 |
| Functional annotation of a full-length mouse cDNA collection General organizer Hayashizaki Y. yosihide@ gsc. riken. go. uk 1 2 44 b Nature 409 (6821), 685-690, 2001 | 883 | 2001 |
| Gateways to the FANTOM5 promoter level mammalian expression atlas M Lizio, J Harshbarger, H Shimoji, J Severin, T Kasukawa, S Sahin, ... Genome biology 16, 1-14, 2015 | 838 | 2015 |
| Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells E Arner, CO Daub, K Vitting-Seerup, R Andersson, B Lilje, F Drabløs, ... Science 347 (6225), 1010-1014, 2015 | 598 | 2015 |
| Thyrotrophin in the pars tuberalis triggers photoperiodic response N Nakao, H Ono, T Yamamura, T Anraku, T Takagi, K Higashi, S Yasuo, ... Nature 452 (7185), 317-322, 2008 | 559 | 2008 |
| An integrated expression atlas of miRNAs and their promoters in human and mouse D De Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor, G Åström, ... Nature biotechnology 35 (9), 872-878, 2017 | 548 | 2017 |
| Integrative annotation of 21,037 human genes validated by full-length cDNA clones T Imanishi, T Itoh, Y Suzuki, C O'donovan, S Fukuchi, KO Koyanagi, ... PLoS biology 2 (6), e162, 2004 | 427 | 2004 |
| Measurement of internal body time by blood metabolomics Y Minami, T Kasukawa, Y Kakazu, M Iigo, M Sugimoto, S Ikeda, A Yasui, ... Proceedings of the National Academy of Sciences 106 (24), 9890-9895, 2009 | 301 | 2009 |
| EpiFactors: a comprehensive database of human epigenetic factors and complexes YA Medvedeva, A Lennartsson, R Ehsani, IV Kulakovskiy, IE Vorontsov, ... Database 2015, bav067, 2015 | 286 | 2015 |
| Human blood metabolite timetable indicates internal body time T Kasukawa, M Sugimoto, A Hida, Y Minami, M Mori, S Honma, K Honma, ... Proceedings of the National Academy of Sciences 109 (37), 15036-15041, 2012 | 233 | 2012 |
| FANTOM5 CAGE profiles of human and mouse samples S Noguchi, T Arakawa, S Fukuda, M Furuno, A Hasegawa, F Hori, ... Scientific data 4 (1), 1-10, 2017 | 231 | 2017 |
| A functional genomics strategy reveals clockwork orange as a transcriptional regulator in the Drosophila circadian clock A Matsumoto, M Ukai-Tadenuma, RG Yamada, J Houl, KD Uno, ... Genes & development 21 (13), 1687-1700, 2007 | 213 | 2007 |
| Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs N Maeda, T Kasukawa, R Oyama, J Gough, M Frith, PG Engström, ... PLoS genetics 2 (4), e62, 2006 | 212 | 2006 |
| Single-cell gene profiling defines differential progenitor subclasses in mammalian neurogenesis A Kawaguchi, T Ikawa, T Kasukawa, HR Ueda, K Kurimoto, M Saitou, ... Oxford University Press for The Company of Biologists Limited 135 (18), 3113 …, 2008 | 203 | 2008 |
