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Anthony Bolger
Anthony Bolger
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Year
Trimmomatic: a flexible trimmer for Illumina sequence data
AM Bolger, M Lohse, B Usadel
Bioinformatics 30 (15), 2114-2120, 2014
382402014
RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics
M Lohse, AM Bolger, A Nagel, AR Fernie, JE Lunn, M Stitt, B Usadel
Nucleic acids research 40 (W1), W622-W627, 2012
8462012
The genome of the stress-tolerant wild tomato species Solanum pennellii
A Bolger, F Scossa, ME Bolger, C Lanz, F Maumus, T Tohge, ...
Nature genetics 46 (9), 1034-1038, 2014
4092014
Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato
D Koenig, JM Jiménez-Gómez, S Kimura, D Fulop, DH Chitwood, ...
Proceedings of the National Academy of Sciences 110 (28), E2655-E2662, 2013
3652013
MapMan4: a refined protein classification and annotation framework applicable to multi-omics data analysis
R Schwacke, GY Ponce-Soto, K Krause, AM Bolger, B Arsova, A Hallab, ...
Molecular plant 12 (6), 879-892, 2019
2482019
Tomato facultative parthenocarpy results from SlAGAMOUS‐LIKE 6 loss of function
C Klap, E Yeshayahou, AM Bolger, T Arazi, SK Gupta, S Shabtai, ...
Plant Biotechnology Journal 15 (5), 634-647, 2017
2122017
De Novo Assembly of a New Solanum pennellii Accession Using Nanopore Sequencing
MHW Schmidt, A Vogel, AK Denton, B Istace, A Wormit, H van de Geest, ...
The Plant Cell 29 (10), 2336-2348, 2017
1842017
Evolution of a Complex Locus for Terpene Biosynthesis in Solanum
Y Matsuba, TTH Nguyen, K Wiegert, V Falara, E Gonzales-Vigil, B Leong, ...
The Plant Cell 25 (6), 2022-2036, 2013
1462013
Footprints of parasitism in the genome of the parasitic flowering plant Cuscuta campestris
A Vogel, R Schwacke, AK Denton, B Usadel, J Hollmann, K Fischer, ...
Nature communications 9 (1), 2515, 2018
1242018
Dual resistance of melon to Fusarium oxysporum races 0 and 2 and to Papaya ring-spot virus is controlled by a pair of head-to-head-oriented NB-LRR genes of unusual architecture
Y Brotman, M Normantovich, Z Goldenberg, Z Zvirin, I Kovalski, N Stovbun, ...
Molecular Plant 6 (1), 235-238, 2013
872013
Algorithm-driven artifacts in median polish summarization of microarray data
FM Giorgi, AM Bolger, M Lohse, B Usadel
BMC bioinformatics 11, 1-12, 2010
662010
Identification of candidate genes for phenolics accumulation in tomato fruit
A Di Matteo, V Ruggieri, A Sacco, MM Rigano, F Carriero, A Bolger, ...
Plant science 205, 87-96, 2013
502013
Fluctuating light interacts with time of day and leaf development stage to reprogram gene expression
T Schneider, A Bolger, J Zeier, S Preiskowski, V Benes, S Trenkamp, ...
Plant Physiology 179 (4), 1632-1657, 2019
482019
Computational aspects underlying genome to phenome analysis in plants
AM Bolger, H Poorter, K Dumschott, ME Bolger, D Arend, S Osorio, ...
The Plant Journal 97 (1), 182-198, 2019
472019
Metabolic adaptation, a specialized leaf organ structure and vascular responses to diurnal N2 fixation by Nostoc azollae sustain the astonishing productivity of Azolla ferns …
P Brouwer, A Bräutigam, VA Buijs, AOE Tazelaar, A Van der Werf, ...
Frontiers in Plant Science 8, 442, 2017
362017
Is there foul play in the leaf pocket? The metagenome of floating fern Azolla reveals endophytes that do not fix N2 but may denitrify
LW Dijkhuizen, P Brouwer, H Bolhuis, GJ Reichart, N Koppers, B Huettel, ...
New Phytologist 217 (1), 453-466, 2018
312018
Streptomyces thermoautotrophicus does not fix nitrogen
D MacKellar, L Lieber, JS Norman, A Bolger, C Tobin, JW Murray, ...
Scientific reports 6 (1), 1-12, 2016
292016
De Novo Transcriptome Analysis of Durum Wheat Flag Leaves Provides New Insights Into the Regulatory Response to Elevated CO2 and High Temperature
R Vicente, AM Bolger, R Martínez-Carrasco, P Pérez, E Gutiérrez, ...
Frontiers in Plant Science 10, 1605, 2019
242019
Isolation of open chromatin identifies regulators of systemic acquired resistance
S Baum, EM Reimer-Michalski, A Bolger, AJ Mantai, V Benes, B Usadel, ...
Plant physiology 181 (2), 817-833, 2019
242019
Genetic and molecular characterization of multicomponent resistance of Pseudomonas against allicin
J Borlinghaus, A Bolger, C Schier, A Vogel, B Usadel, MCH Gruhlke, ...
Life science alliance 3 (5), 2020
122020
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