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Simon Orozco Arias
Simon Orozco Arias
Institute of Evolutionary Biology, CSIC, UPF
Verified email at ibe.upf-csic.es
Title
Cited by
Cited by
Year
Retrotransposons in plant genomes: structure, identification, and classification through bioinformatics and machine learning
S Orozco-Arias, G Isaza, R Guyot
International journal of molecular sciences 20 (15), 3837, 2019
822019
COVID-19 detection in X-ray images using convolutional neural networks
D Arias-Garzón, JA Alzate-Grisales, S Orozco-Arias, HB Arteaga-Arteaga, ...
Machine Learning with Applications 6, 100138, 2021
782021
A comparative study of machine learning and deep learning algorithms to classify cancer types based on microarray gene expression data
R Tabares-Soto, S Orozco-Arias, V Romero-Cano, VS Bucheli, ...
PeerJ Computer Science 6, e270, 2020
752020
GBRAS-Net: a convolutional neural network architecture for spatial image steganalysis
TS Reinel, AAH Brayan, BOM Alejandro, MR Alejandro, AG Daniel, ...
IEEE Access 9, 14340-14350, 2021
662021
Measuring performance metrics of machine learning algorithms for detecting and classifying transposable elements
S Orozco-Arias, JS Pińa, R Tabares-Soto, LF Castillo-Ossa, R Guyot, ...
Processes 8 (6), 638, 2020
402020
A systematic review of the application of machine learning in the detection and classification of transposable elements
S Orozco-Arias, G Isaza, R Guyot, R Tabares-Soto
PeerJ 7, e8311, 2019
312019
Inpactor, integrated and parallel analyzer and classifier of LTR retrotransposons and its application for pineapple LTR retrotransposons diversity and dynamics
S Orozco-Arias, J Liu, R Tabares-Soto, D Ceballos, D Silva Domingues, ...
Biology 7 (2), 32, 2018
292018
Optimized Convolutional Neural Network Models for Skin Lesion Classification
JP Villa-Pulgarin, AA Ruales-Torres, D Arias-Garzón, MA Bravo-Ortiz, ...
Computers, Materials \& Continua 70 (2), 2131--2148, 2021
272021
Structure and distribution of centromeric retrotransposons at diploid and allotetraploid Coffea centromeric and pericentromeric regions
R de Castro Nunes, S Orozco-Arias, D Crouzillat, LA Mueller, C Fournier, ...
Frontiers in plant science 9, 318752, 2018
272018
The absence of the caffeine synthase gene is involved in the naturally decaffeinated status of Coffea humblotiana, a wild species from Comoro archipelago
N Raharimalala, S Rombauts, A McCarthy, A Garavito, S Orozco-Arias, ...
Scientific reports 11 (1), 8119, 2021
242021
Digital media steganalysis
R Tabares-Soto, R Ramos-Pollán, G Isaza, S Orozco-Arias, MAB Ortíz, ...
Digital Media Steganography, 259-293, 2020
232020
Application of Data Mining Algorithms to Classify Biological Data: The Coffea canephora Genome Case
J Arango-López, S Orozco-Arias, JA Salazar, R Guyot
Advances in Computing: 12th Colombian Conference, CCC 2017, Cali, Colombia …, 2017
192017
K-mer-based machine learning method to classify LTR-retrotransposons in plant genomes
S Orozco-Arias, MS Candamil-Cortés, PA Jaimes, JS Pińa, ...
PeerJ 9, e11456, 2021
182021
InpactorDB: a classified lineage-level plant LTR retrotransposon reference library for free-alignment methods based on machine learning
S Orozco-Arias, PA Jaimes, MS Candamil, CF Jiménez-Varón, ...
Genes 12 (2), 190, 2021
182021
Machine learning applications to predict two-phase flow patterns
HB Arteaga-Arteaga, A Mora-Rubio, F Florez, N Murcia-Orjuela, ...
PeerJ Computer Science 7, e798, 2021
162021
Strategy to improve the accuracy of convolutional neural network architectures applied to digital image steganalysis in the spatial domain
R Tabares-Soto, HB Arteaga-Arteaga, A Mora-Rubio, MA Bravo-Ortíz, ...
PeerJ Computer Science 7, e451, 2021
162021
Coffee maturity classification using convolutional neural networks and transfer learning
MA Tamayo-Monsalve, E Mercado-Ruiz, JP Villa-Pulgarin, ...
IEEE Access 10, 42971-42982, 2022
152022
Cervical cancer classification using convolutional neural networks, transfer learning and data augmentation
MA BRAVO-ORTÍZ, HB ARTEAGA-ARTEAGA, KLR TABARES-SOTO, ...
Revista EIA 18 (35), 100-111, 2021
15*2021
Sensitivity of deep learning applied to spatial image steganalysis
R Tabares-Soto, HB Arteaga-Arteaga, A Mora-Rubio, MA Bravo-Ortíz, ...
PeerJ Computer Science 7, e616, 2021
102021
Parallel programming in biological sciences, taking advantage of supercomputing in genomics
S Orozco-Arias, R Tabares-Soto, D Ceballos, R Guyot
Advances in Computing: 12th Colombian Conference, CCC 2017, Cali, Colombia …, 2017
102017
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