متابعة
David Dylus
David Dylus
Senior Scientist, Systems Biology, Roche
بريد إلكتروني تم التحقق منه على roche.com
عنوان
عدد مرات الاقتباسات
عدد مرات الاقتباسات
السنة
The OMA orthology database in 2018: retrieving evolutionary relationships among all domains of life through richer web and programmatic interfaces
AM Altenhoff, NM Glover, CM Train, K Kaleb, A Warwick Vesztrocy, ...
Nucleic acids research 46 (D1), D477-D485, 2018
2372018
Phylo.io : Interactive Viewing and Comparison of Large Phylogenetic Trees on the Web
O Robinson, D Dylus, C Dessimoz
Molecular biology and evolution 33 (8), 2163-2166, 2016
2112016
OMA standalone: orthology inference among public and custom genomes and transcriptomes
AM Altenhoff, J Levy, M Zarowiecki, B Tomiczek, AW Vesztrocy, ...
Genome research 29 (7), 1152-1163, 2019
1132019
The phylogenetic range of bacterial and viral pathogens of vertebrates
LP Shaw, AD Wang, D Dylus, M Meier, G Pogacnik, C Dessimoz, ...
Molecular ecology 29 (17), 3361-3379, 2020
792020
Expression of skeletogenic genes during arm regeneration in the brittle star Amphiura filiformis
A Czarkwiani, DV Dylus, P Oliveri
Gene Expression Patterns 13 (8), 464-472, 2013
622013
Large-scale gene expression study in the ophiuroid Amphiura filiformis provides insights into evolution of gene regulatory networks
DV Dylus, A Czarkwiani, J Stångberg, O Ortega-Martinez, S Dupont, ...
Evodevo 7, 1-17, 2016
542016
Skeletal regeneration in the brittle star Amphiura filiformis
A Czarkwiani, C Ferrario, DV Dylus, M Sugni, P Oliveri
Frontiers in zoology 13, 1-17, 2016
532016
Developmental transcriptomics of the brittle star Amphiura filiformis reveals gene regulatory network rewiring in echinoderm larval skeleton evolution
DV Dylus, A Czarkwiani, LM Blowes, MR Elphick, P Oliveri
Genome biology 19, 1-17, 2018
352018
FGF signalling plays similar roles in development and regeneration of the skeleton in the brittle star Amphiura filiformis
A Czarkwiani, DV Dylus, L Carballo, P Oliveri
Development 148 (10), dev180760, 2021
212021
RecPhyloXML: a format for reconciled gene trees
W Duchemin, G Gence, AM Arigon Chifolleau, L Arvestad, MS Bansal, ...
Bioinformatics 34 (21), 3646-3652, 2018
212018
A novel antibiotic class targeting the lipopolysaccharide transporter
C Zampaloni, P Mattei, K Bleicher, L Winther, C Thäte, C Bucher, ...
Nature, 1-6, 2024
192024
Inference of phylogenetic trees directly from raw sequencing reads using Read2Tree
D Dylus, A Altenhoff, S Majidian, FJ Sedlazeck, C Dessimoz
Nature Biotechnology 42 (1), 139-147, 2024
152024
NGS-Based S. aureus Typing and Outbreak Analysis in Clinical Microbiology Laboratories: Lessons Learned From a Swiss-Wide Proficiency Test
D Dylus, T Pillonel, O Opota, D Wüthrich, HMB Seth-Smith, A Egli, S Leo, ...
Frontiers in microbiology 11, 591093, 2020
112020
How to build phylogenetic species trees with OMA
D Dylus, Y Nevers, AM Altenhoff, A Gürtler, C Dessimoz, NM Glover
F1000Research 9, 2020
112020
New genome assembly of the barn owl (Tyto alba alba)
AL Ducrest, S Neuenschwander, E Schmid‐Siegert, M Pagni, C Train, ...
Ecology and evolution 10 (5), 2284-2298, 2020
92020
Taxon sampling unequally affects individual nodes in a phylogenetic tree: consequences for model gene tree construction in SwissTree
B Boeckmann, D Dylus, S Moretti, A Altenhoff, CM Train, E Kriventseva, ...
biorxiv, 181966, 2017
42017
Bifurcation search via feedback loop breaking in biochemical signaling pathways with time delay
S Waldherr, D Dylus, F Allgöwer
Asian Journal of Control 13 (5), 691-700, 2011
42011
Extracellular matrix gene expression during arm regeneration in Amphiura filiformis
C Ferrario, A Czarkwiani, DV Dylus, L Piovani, MD Candia Carnevali, ...
Cell and tissue research 381 (3), 411-426, 2020
32020
The brittle star genome illuminates the genetic basis of animal appendage regeneration
E Parey, O Ortega-Martinez, J Delroisse, L Piovani, A Czarkwiani, D Dylus, ...
BioRxiv, 2023.10. 30.564762, 2023
12023
Human Th17-and IgG3-associated autoimmunity induced by a translocating gut pathobiont
K Gronke, M Nguyen, N Santamaria de Souza, J Schumacher, Y Yang, ...
bioRxiv, 2023.06. 29.546430, 2023
12023
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مقالات 1–20