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Guido Uguzzoni
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Large-scale identification of coevolution signals across homo-oligomeric protein interfaces by direct coupling analysis
G Uguzzoni, S John Lovis, F Oteri, A Schug, H Szurmant, M Weigt
Proceedings of the National Academy of Sciences 114 (13), E2662-E2671, 2017
962017
Maximum-entropy models of sequenced immune repertoires predict antigen-antibody affinity
L Asti, G Uguzzoni, P Marcatili, A Pagnani
PLoS computational biology 12 (4), e1004870, 2016
312016
Direct coevolutionary couplings reflect biophysical residue interactions in proteins
A Coucke, G Uguzzoni, F Oteri, S Cocco, R Monasson, M Weigt
The Journal of chemical physics 145 (17), 174102, 2016
212016
Collective behaviours: from biochemical kinetics to electronic circuits
E Agliari, A Barra, R Burioni, A Di Biasio, G Uguzzoni
Scientific Reports 3 (1), 1-15, 2013
212013
MIIC online: a web server to reconstruct causal or non-causal networks from non-perturbative data
N Sella, L Verny, G Uguzzoni, S Affeldt, H Isambert
Bioinformatics 34 (13), 2311-2313, 2018
142018
Efficient generative modeling of protein sequences using simple autoregressive models
J Trinquier, G Uguzzoni, A Pagnani, F Zamponi, M Weigt
Nature communications 12 (1), 1-11, 2021
132021
The true reinforced random walk with bias
E Agliari, R Burioni, G Uguzzoni
New Journal of Physics 14 (6), 063027, 2012
112012
Unsupervised inference of protein fitness landscape from deep mutational scan
J Fernandez-de-Cossio-Diaz, G Uguzzoni, A Pagnani
Molecular biology and evolution 38 (1), 318-328, 2021
102021
Analogue neural networks on correlated random graphs
E Agliari, L Asti, A Barra, R Burioni, G Uguzzoni
Journal of Physics A: Mathematical and Theoretical 45 (36), 365001, 2012
92012
Learning clinical networks from medical records based on information estimates in mixed-type data
V Cabeli, L Verny, N Sella, G Uguzzoni, M Verny, H Isambert
PLoS computational biology 16 (5), e1007866, 2020
82020
Reaction networks as systems for resource allocation: A variational principle for their non-equilibrium steady states
A De Martino, D De Martino, R Mulet, G Uguzzoni
PloS one 7 (7), e39849, 2012
82012
Amala: Analysis of directed evolution experiments via annealed mutational approximated landscape
L Sesta, G Uguzzoni, J Fernandez-de-Cossio-Diaz, A Pagnani
International journal of molecular sciences 22 (20), 10908, 2021
12021
Efficient generative modeling of protein sequences using simple autoregressive models (vol 12, pg 5800, 2021)
J Trinquier, G Uguzzoni, A Pagnani, F Zamponi, M Weigt
NATURE COMMUNICATIONS 13 (1), 2022
2022
Author Correction: Efficient generative modeling of protein sequences using simple autoregressive models
J Trinquier, G Uguzzoni, A Pagnani, F Zamponi, M Weigt
Nature Communications 13 (1), 1-2, 2022
2022
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Articles 1–14