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Mary Shimoyama
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The gene ontology resource: 20 years and still GOing strong
Gene Ontology Consortium
Nucleic acids research 47 (D1), D330-D338, 2019
23342019
The gene ontology (GO) project in 2006
Gene Ontology Consortium
Nucleic acids research 34 (suppl_1), D322-D326, 2006
7342006
The gene ontology project in 2008
Gene Ontology Consortium
Nucleic acids research 36 (suppl_1), D440-D444, 2008
673*2008
Gene Ontology annotations and resources
Gene Ontology Consortium
Nucleic acids research 41 (D1), D530-D535, 2012
5142012
The Gene Ontology in 2010: extensions and refinements
Gene Ontology Consortium
Nucleic acids research 38 (suppl_1), D331-D335, 2010
4472010
Integrative annotation of 21,037 human genes validated by full-length cDNA clones
T Imanishi, T Itoh, Y Suzuki, C O'donovan, S Fukuchi, KO Koyanagi, ...
PLoS biology 2 (6), e162, 2004
4222004
The Rat Genome Database 2015: genomic, phenotypic and environmental variations and disease
M Shimoyama, J De Pons, GT Hayman, SJF Laulederkind, W Liu, ...
Nucleic acids research 43 (D1), D743-D750, 2015
2292015
Expansion of the Gene Ontology knowledgebase and resources
S Carbon, J Chan, R Kishore, R Lee, HM Muller, D Raciti, K Van Auken, ...
Nucleic acids research 45 (D1), D331-D338, 2017
1722017
The Rat Genome Database, update 2007—easing the path from disease to data and back again
SN Twigger, M Shimoyama, S Bromberg, AE Kwitek, HJ Jacob, RGD team
Nucleic acids research 35 (suppl_1), D658-D662, 2007
1542007
RNAcentral: a hub of information for non-coding RNA sequences
Nucleic acids research 47 (D1), D221-D229, 2019
1472019
Rat Genome Database (RGD): mapping disease onto the genome
S Twigger, J Lu, M Shimoyama, D Chen, D Pasko, H Long, J Ginster, ...
Nucleic acids research 30 (1), 125-128, 2002
1192002
Genomics in clinical practice: lessons from the front lines
HJ Jacob, K Abrams, DP Bick, K Brodie, DP Dimmock, M Farrell, J Geurts, ...
Science translational medicine 5 (194), 194cm5-194cm5, 2013
1052013
The Rat Genome Database 2009: variation, ontologies and pathways
MR Dwinell, EA Worthey, M Shimoyama, B Bakir-Gungor, J DePons, ...
Nucleic acids research 37 (suppl_1), D744-D749, 2009
882009
The Rat Genome Database 2013—data, tools and users
SJF Laulederkind, GT Hayman, SJ Wang, JR Smith, TF Lowry, R Nigam, ...
Briefings in bioinformatics 14 (4), 520-526, 2013
852013
The pathway ontology–updates and applications
V Petri, P Jayaraman, M Tutaj, GT Hayman, JR Smith, J De Pons, ...
Journal of biomedical semantics 5 (1), 1-12, 2014
832014
Alliance of Genome Resources Portal: unified model organism research platform
Nucleic acids research 48 (D1), D650-D658, 2020
822020
The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts
Genome Information Integration Project And H-Invitational 2
Nucleic acids research 36 (suppl_1), D793-D799, 2007
752007
A revised nomenclature for the human and rodent α-tubulin gene family
VK Khodiyar, LJ Maltais, KMB Sneddon, JR Smith, M Shimoyama, ...
Genomics 90 (2), 285-289, 2007
702007
The Year of the Rat: The Rat Genome Database at 20: a multi-species knowledgebase and analysis platform
JR Smith, GT Hayman, SJ Wang, SJF Laulederkind, MJ Hoffman, ...
Nucleic acids research 48 (D1), D731-D742, 2020
672020
The Rat Genome Database (RGD): developments towards a phenome database
N De La Cruz, S Bromberg, D Pasko, M Shimoyama, S Twigger, J Chen, ...
Nucleic acids research 33 (suppl_1), D485-D491, 2005
642005
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