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Luis Pedro Coelho
Luis Pedro Coelho
Centre for Microbiome Research, Queensland University of Technology
Verified email at qut.edu.au - Homepage
Title
Cited by
Cited by
Year
Structure and function of the global ocean microbiome
S Sunagawa, LP Coelho, S Chaffron, JR Kultima, K Labadie, G Salazar, ...
Science 348 (6237), 2015
26092015
Fast genome-wide functional annotation through orthology assignment by eggNOG-mapper
J Huerta-Cepas, K Forslund, LP Coelho, D Szklarczyk, LJ Jensen, ...
Mol Biol Evol, msx148, 2017
24482017
Structure and function of the global topsoil microbiome
M Bahram, F Hildebrand, SK Forslund, JL Anderson, NA Soudzilovskaia, ...
Nature 560 (7717), 233-237, 2018
19062018
Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer
J Wirbel, PT Pyl, E Kartal, K Zych, A Kashani, A Milanese, JS Fleck, ...
Nature medicine 25 (4), 679-689, 2019
10502019
A community effort to assess and improve drug sensitivity prediction algorithms
JC Costello, LM Heiser, E Georgii, M Gönen, MP Menden, NJ Wang, ...
Nature biotechnology 32 (12), 1202-1212, 2014
8152014
Towards standards for human fecal sample processing in metagenomic studies.
PI Costea, G Zeller, S Sunagawa, E Pelletier, A Alberti, F Levenez, ...
Nature biotechnology, 2017
8142017
Plankton networks driving carbon export in the oligotrophic ocean
L Guidi, S Chaffron, L Bittner, D Eveillard, A Larhlimi, S Roux, Y Darzi, ...
Nature, 2016
7922016
Recovery of gut microbiota of healthy adults following antibiotic exposure
A Palleja, KH Mikkelsen, SK Forslund, A Kashani, KH Allin, T Nielsen, ...
Nature microbiology 3 (11), 1255-1265, 2018
7192018
Functional implications of microbial and viral gut metagenome changes in early stage L-DOPA-naïve Parkinson’s disease patients
JR Bedarf, F Hildebrand, LP Coelho, S Sunagawa, M Bahram, F Goeser, ...
Genome medicine 9, 1-13, 2017
6122017
Metagenomic species profiling using universal phylogenetic marker genes
S Sunagawa, DR Mende, G Zeller, F Izquierdo-Carrasco, SA Berger, ...
Nature methods 10 (12), 1196-1199, 2013
5372013
Extensive transmission of microbes along the gastrointestinal tract
TSB Schmidt, MR Hayward, LP Coelho, SS Li, PI Costea, AY Voigt, ...
eLife 8, e42693, 2019
4762019
Microbial abundance, activity and population genomic profiling with mOTUs2
A Milanese, DR Mende, L Paoli, G Salazar, HJ Ruscheweyh, M Cuenca, ...
Nature Communications 10 (1), 1014, 2019
4352019
Statin therapy is associated with lower prevalence of gut microbiota dysbiosis
S Vieira-Silva, G Falony, E Belda, T Nielsen, J Aron-Wisnewsky, ...
Nature 581 (7808), 310-315, 2020
4002020
Global trends in marine plankton diversity across kingdoms of life
FM Ibarbalz, N Henry, MC Brandão, S Martini, G Busseni, H Byrne, ...
Cell 179 (5), 1084-1097. e21, 2019
3842019
Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome
G Salazar, L Paoli, A Alberti, J Huerta-Cepas, HJ Ruscheweyh, M Cuenca, ...
Cell 179 (5), 1068-1083. e21, 2019
3442019
A community computational challenge to predict the activity of pairs of compounds
M Bansal, J Yang, C Karan, MP Menden, JC Costello, H Tang, G Xiao, ...
Nature biotechnology 32 (12), 1213-1222, 2014
3432014
Host-cell sensors for Plasmodium activate innate immunity against liver-stage infection
P Liehl, V Zuzarte-Luís, J Chan, T Zillinger, F Baptista, D Carapau, ...
Nature medicine 20 (1), 47-53, 2014
3412014
Selective maternal seeding and environment shape the human gut microbiome
K Korpela, PI Costea, LP Coelho, S Kandels-Lewis, G Willemsen, ...
Genome Research, gr. 233940.117, 2018
3312018
Similarity of the dog and human gut microbiomes in gene content and response to diet
LP Coelho, JR Kultima, PI Costea, C Fournier, Y Pan, ...
Microbiome 6 (1), 72, 2018
3112018
Mahotas: Open source software for scriptable computer vision
LP Coelho
Journal of Open Research Software 1, e3, 2013
2992013
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Articles 1–20