“Newton’s cradle” proton relay with amide–imidic acid tautomerization in inverting cellulase visualized by neutron crystallography A Nakamura, T Ishida, K Kusaka, T Yamada, S Fushinobu, I Tanaka, ... Science advances 1 (7), e1500263, 2015 | 100 | 2015 |
The tryptophan residue at the active site tunnel entrance of Trichoderma reesei cellobiohydrolase Cel7A is important for initiation of degradation of crystalline cellulose A Nakamura, T Tsukada, S Auer, T Furuta, M Wada, A Koivula, K Igarashi, ... Journal of Biological Chemistry 288 (19), 13503-13510, 2013 | 95 | 2013 |
Trade-off between processivity and hydrolytic velocity of cellobiohydrolases at the surface of crystalline cellulose A Nakamura, H Watanabe, T Ishida, T Uchihashi, M Wada, T Ando, ... Journal of the American Chemical Society 136 (12), 4584-4592, 2014 | 89 | 2014 |
Single-molecule imaging analysis of elementary reaction steps of Trichoderma reesei cellobiohydrolase I (Cel7A) hydrolyzing crystalline cellulose Iα and IIII Y Shibafuji, A Nakamura, T Uchihashi, N Sugimoto, S Fukuda, ... Journal of Biological Chemistry 289 (20), 14056-14065, 2014 | 65 | 2014 |
Processive chitinase is Brownian monorail operated by fast catalysis after peeling rail from crystalline chitin A Nakamura, K Okazaki, T Furuta, M Sakurai, R Iino Nature Communications 9 (1), 3814, 2018 | 64 | 2018 |
Positive charge introduction on the surface of thermostabilized PET hydrolase facilitates PET binding and degradation A Nakamura, N Kobayashi, N Koga, R Iino ACS Catalysis 11 (14), 8550-8564, 2021 | 57 | 2021 |
Single-molecule imaging analysis of binding, processive movement, and dissociation of cellobiohydrolase Trichoderma reesei Cel6A and its domains on crystalline cellulose A Nakamura, T Tasaki, D Ishiwata, M Yamamoto, Y Okuni, A Visootsat, ... Journal of Biological Chemistry 291 (43), 22404-22413, 2016 | 54 | 2016 |
Single-nanoparticle tracking with angstrom localization precision and microsecond time resolution J Ando, A Nakamura, A Visootsat, M Yamamoto, C Song, K Murata, R Iino Biophysical journal 115 (12), 2413-2427, 2018 | 40 | 2018 |
3-connectivity augmentation problems T Watanabe, A Nakamura 1988 IEEE International Symposium on Circuits and Systems (ISCAS), 1847-1850, 1988 | 39 | 1988 |
Convergent evolution of processivity in bacterial and fungal cellulases T Uchiyama, T Uchihashi, A Nakamura, H Watanabe, S Kaneko, ... Proceedings of the National Academy of Sciences 117 (33), 19896-19903, 2020 | 33 | 2020 |
Structural and biochemical analyses of glycoside hydrolase family 26 β-mannanase from a symbiotic protist of the termite Reticulitermes speratus H Tsukagoshi, A Nakamura, T Ishida, KK Touhara, M Otagiri, S Moriya, ... Journal of Biological Chemistry 289 (15), 10843-10852, 2014 | 32 | 2014 |
The GH26 β-mannanase RsMan26H from a symbiotic protist of the termite Reticulitermes speratus is an endo-processive mannobiohydrolase: heterologous expression and characterization H Tsukagoshi, A Nakamura, T Ishida, M Otagiri, S Moriya, M Samejima, ... Biochemical and Biophysical Research Communications 452 (3), 520-525, 2014 | 29 | 2014 |
Rate constants, processivity, and productive binding ratio of chitinase A revealed by single-molecule analysis A Nakamura, T Tasaki, Y Okuni, C Song, K Murata, T Kozai, M Hara, ... Physical Chemistry Chemical Physics 20 (5), 3010-3018, 2018 | 28 | 2018 |
Development of simple random mutagenesis protocol for the protein expression system in Pichia pastoris M Tachioka, N Sugimoto, A Nakamura, N Sunagawa, T Ishida, ... Biotechnology for Biofuels 9, 1-10, 2016 | 24 | 2016 |
Multicolor High-Speed Tracking of Single Biomolecules with Silver, Gold, and Silver–Gold Alloy Nanoparticles J Ando, A Nakamura, M Yamamoto, C Song, K Murata, R Iino ACS Photonics 6 (11), 2870-2883, 2019 | 22 | 2019 |
Lytic polysaccharide monooxygenase increases cellobiohydrolases activity by promoting decrystallization of cellulose surface T Uchiyama, T Uchihashi, T Ishida, A Nakamura, JV Vermaas, ... Science Advances 8 (51), eade5155, 2022 | 21 | 2022 |
Single-molecule imaging and manipulation of biomolecular machines and systems R Iino, T Iida, A Nakamura, E Saita, H You, Y Sako Biochimica et Biophysica Acta (BBA)-General Subjects 1862 (2), 241-252, 2018 | 21 | 2018 |
Domain architecture divergence leads to functional divergence in binding and catalytic domains of bacterial and fungal cellobiohydrolases A Nakamura, D Ishiwata, A Visootsat, T Uchiyama, K Mizutani, S Kaneko, ... Journal of Biological Chemistry 295 (43), 14606-14617, 2020 | 19 | 2020 |
Small stepping motion of processive dynein revealed by load-free high-speed single-particle tracking J Ando, T Shima, R Kanazawa, R Shimo-Kon, A Nakamura, M Yamamoto, ... Scientific reports 10 (1), 1080, 2020 | 18 | 2020 |
Phase-diagram-guided method for growth of a large crystal of glycoside hydrolase family 45 inverting cellulase suitable for neutron structural analysis A Nakamura, T Ishida, S Fushinobu, K Kusaka, I Tanaka, K Inaka, ... Journal of Synchrotron Radiation 20 (6), 859-863, 2013 | 18 | 2013 |