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Ludovico Sutto
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Year
Effects of oncogenic mutations on the conformational free-energy landscape of EGFR kinase
L Sutto, FL Gervasio
Proceedings of the National Academy of Sciences 110 (26), 10616-10621, 2013
1572013
New advances in metadynamics
L Sutto, S Marsili, FL Gervasio
Wiley Interdisciplinary Reviews: Computational Molecular Science 2 (5), 771-779, 2012
1412012
From residue coevolution to protein conformational ensembles and functional dynamics
L Sutto, S Marsili, A Valencia, FL Gervasio
Proceedings of the National Academy of Sciences 112 (44), 13567-13572, 2015
1212015
The different flexibility of c-Src and c-Abl kinases regulates the accessibility of a druggable inactive conformation
S Lovera, L Sutto, R Boubeva, L Scapozza, N Dölker, FL Gervasio
Journal of the American Chemical Society 134 (5), 2496-2499, 2012
1122012
Consequences of localized frustration for the folding mechanism of the IM7 protein
L Sutto, J Lätzer, JA Hegler, DU Ferreiro, PG Wolynes
Proceedings of the National Academy of Sciences 104 (50), 19825-19830, 2007
992007
The effect of mutations on drug sensitivity and kinase activity of fibroblast growth factor receptors: a combined experimental and theoretical study
TD Bunney, S Wan, N Thiyagarajan, L Sutto, SV Williams, P Ashford, ...
EBioMedicine 2 (3), 194-204, 2015
732015
Use of the Metropolis algorithm to simulate the dynamics of protein chains
G Tiana, L Sutto, RA Broglia
Physica A: Statistical Mechanics and its Applications 380, 241-249, 2007
702007
Changes in the free-energy landscape of p38α MAP kinase through its canonical activation and binding events as studied by enhanced molecular dynamics simulations
A Kuzmanic, L Sutto, G Saladino, AR Nebreda, FL Gervasio, M Orozco
Elife 6, 2017
522017
Molecular engineering of polymersome surface topology
L Ruiz-Pérez, L Messager, J Gaitzsch, A Joseph, L Sutto, FL Gervasio, ...
Science advances 2 (4), e1500948, 2016
522016
Comparing the efficiency of biased and unbiased molecular dynamics in reconstructing the free energy landscape of met-enkephalin
L Sutto, M D’Abramo, FL Gervasio
Journal of Chemical Theory and Computation 6 (12), 3640-3646, 2010
482010
Design of HIV‐1‐PR inhibitors that do not create resistance: Blocking the folding of single monomers
RA Broglia, G Tiana, L Sutto, D Provasi, F Simona
Protein science 14 (10), 2668-2681, 2005
462005
Conformational changes and free energies in a proline isomerase
E Papaleo, L Sutto, FL Gervasio, K Lindorff-Larsen
Journal of Chemical Theory and Computation 10 (9), 4169-4174, 2014
452014
The effect of a widespread cancer-causing mutation on the inactive to active dynamics of the B-Raf kinase
KA Marino, L Sutto, FL Gervasio
Journal of the American Chemical Society 137 (16), 5280-5283, 2015
422015
Sequence of events in folding mechanism: Beyond the Gō model
L Sutto, G Tiana, RA Broglia
Protein science 15 (7), 1638-1652, 2006
372006
An allosteric cross-talk between the activation loop and the ATP binding site regulates the activation of Src kinase
E Pucheta-Martínez, G Saladino, MA Morando, J Martinez-Torrecuadrada, ...
Scientific reports 6 (1), 1-7, 2016
362016
Wiley Interdiscip
L Sutto, S Marsili, FL Gervasio
Rev.: Comput. Mol. Sci 2 (771), 10.1002, 2012
322012
The SH2 domain regulates c-Abl kinase activation by a cyclin-like mechanism and remodulation of the hinge motion
N Dölker, MW Górna, L Sutto, AS Torralba, G Superti-Furga, FL Gervasio
PLoS computational biology 10 (10), e1003863, 2014
272014
A Hybrid All-Atom Structure-Based Model for Protein Folding and Large Scale Conformational Transitions
L Sutto, I Mereu, FL Gervasio
Journal of Chemical Theory and Computation 7, 4208-4217, 2011
242011
Lymphotactin: how a protein can adopt two folds
C Camilloni, L Sutto
The Journal of chemical physics 131 (24), 12B622, 2009
202009
Early events in protein folding: Is there something more than hydrophobic burst?
C Camilloni, L Sutto, D Provasi, G Tiana, RA Broglia
Protein Science 17 (8), 1424-1433, 2008
202008
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