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| Why do hubs in the yeast protein interaction network tend to be essential: reexamining the connection between the network topology and essentiality E Zotenko, J Mestre, DP O'Leary, TM Przytycka PLoS computational biology 4 (8), e1000140, 2008 | 483 | 2008 |
| Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly H Li, J Janssens, M De Waegeneer, SS Kolluru, K Davie, V Gardeux, ... Science 375 (6584), eabk2432, 2022 | 432 | 2022 |
| From hype to reality: data science enabling personalized medicine H Fröhlich, R Balling, N Beerenwinkel, O Kohlbacher, S Kumar, ... BMC medicine 16, 1-15, 2018 | 424 | 2018 |
| A simple parallel tree contraction algorithm K Abrahamson, N Dadoun, DG Kirkpatrick, T Przytycka Journal of Algorithms 10 (2), 287-302, 1989 | 363 | 1989 |
| Genome-wide detection of DNase I hypersensitive sites in single cells and FFPE tissue samples W Jin, Q Tang, M Wan, K Cui, Y Zhang, G Ren, B Ni, J Sklar, TM Przytycka, ... Nature 528 (7580), 142-146, 2015 | 338 | 2015 |
| Chapter 5: Network biology approach to complex diseases DY Cho, YA Kim, TM Przytycka PLoS computational biology 8 (12), e1002820, 2012 | 328 | 2012 |
| Transcription-dependent dynamic supercoiling is a short-range genomic force F Kouzine, A Gupta, L Baranello, D Wojtowicz, K Ben-Aissa, J Liu, ... Nature structural & molecular biology 20 (3), 396-403, 2013 | 325 | 2013 |
| Toward the dynamic interactome: it's about time TM Przytycka, M Singh, DK Slonim Briefings in bioinformatics 11 (1), 15-29, 2010 | 312 | 2010 |
| RNA polymerase II regulates topoisomerase 1 activity to favor efficient transcription L Baranello, D Wojtowicz, K Cui, BN Devaiah, HJ Chung, KY Chan-Salis, ... Cell 165 (2), 357-371, 2016 | 283 | 2016 |
| Identifying causal genes and dysregulated pathways in complex diseases YA Kim, S Wuchty, TM Przytycka PLoS computational biology 7 (3), e1001095, 2011 | 227 | 2011 |
| Permanganate/S1 nuclease footprinting reveals non-B DNA structures with regulatory potential across a mammalian genome F Kouzine, D Wojtowicz, L Baranello, A Yamane, S Nelson, W Resch, ... Cell systems 4 (3), 344-356. e7, 2017 | 204 | 2017 |
| Genomic analysis reveals a tight link between transcription factor dynamics and regulatory network architecture R Jothi, S Balaji, A Wuster, JA Grochow, J Gsponer, TM Przytycka, ... Molecular systems biology 5 (1), 294, 2009 | 183 | 2009 |
| Comparative validation of the D. melanogaster modENCODE transcriptome annotation ZX Chen, D Sturgill, J Qu, H Jiang, S Park, N Boley, AM Suzuki, ... Genome research 24 (7), 1209-1223, 2014 | 181 | 2014 |
| DOMINE: a database of protein domain interactions B Raghavachari, A Tasneem, TM Przytycka, R Jothi Nucleic acids research 36 (suppl_1), D656-D661, 2008 | 175 | 2008 |
| Co-evolutionary analysis of domains in interacting proteins reveals insights into domain–domain interactions mediating protein–protein interactions R Jothi, PF Cherukuri, A Tasneem, TM Przytycka Journal of molecular biology 362 (4), 861-875, 2006 | 171 | 2006 |
| Global regulation of promoter melting in naive lymphocytes F Kouzine, D Wojtowicz, A Yamane, W Resch, KR Kieffer-Kwon, R Bandle, ... Cell 153 (5), 988-999, 2013 | 165 | 2013 |
| An O(nlog n) Algorithm for the Maximum Agreement Subtree Problem for Binary Trees R Cole, M Farach-Colton, R Hariharan, T Przytycka, M Thorup SIAM Journal on Computing 30 (5), 1385-1404, 2000 | 147 | 2000 |
| A protein taxonomy based on secondary structure T Przytycka, R Aurora, GD Rose Nature structural biology 6 (7), 672-682, 1999 | 144 | 1999 |
| Sex-and tissue-specific functions of Drosophila doublesex transcription factor target genes E Clough, E Jimenez, YA Kim, C Whitworth, MC Neville, LU Hempel, ... Developmental cell 31 (6), 761-773, 2014 | 139 | 2014 |
Damian WójtowiczFaculty of Mathematics, Informatics and Mechanics, University of WarsawVerified email at mimuw.edu.pl
