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Valmir C. Barbosa
Valmir C. Barbosa
Verified email at cos.ufrj.br - Homepage
Title
Cited by
Cited by
Year
An introduction to distributed algorithms
VC Barbosa
Mit Press, 1996
2671996
Integrated analysis of shotgun proteomic data with PatternLab for proteomics 4.0
PC Carvalho, DB Lima, FV Leprevost, MDM Santos, JSG Fischer, ...
Nature protocols 11 (1), 102-117, 2016
2502016
Concurrency in heavily loaded neighborhood-constrained systems
VC Barbosa, E Gafni
ACM Transactions on Programming Languages and Systems (TOPLAS) 11 (4), 562-584, 1989
1611989
PatternLab for proteomics: a tool for differential shotgun proteomics
PC Carvalho, JSG Fischer, EI Chen, JR Yates, VC Barbosa
BMC bioinformatics 9, 1-14, 2008
1502008
Search engine processor: filtering and organizing peptide spectrum matches
PC Carvalho, JSG Fischer, T Xu, D Cociorva, TS Balbuena, RH Valente, ...
Proteomics 12 (7), 944-949, 2012
1292012
XDIA: improving on the label-free data-independent analysis
PC Carvalho, X Han, T Xu, D Cociorva, MG Carvalho, VC Barbosa, ...
Bioinformatics 26 (6), 847-848, 2010
1222010
Identifying differences in protein expression levels by spectral counting and feature selection
PC Carvalho, J Hewel, VC Barbosa, JR Yates III
Genetics and molecular research: GMR 7 (2), 342, 2008
1112008
SIM-XL: A powerful and user-friendly tool for peptide cross-linking analysis
DB Lima, TB de Lima, TS Balbuena, AGC Neves-Ferreira, VC Barbosa, ...
Journal of proteomics 129, 51-55, 2015
1012015
YADA: a tool for taking the most out of high-resolution spectra
PC Carvalho, T Xu, X Han, D Cociorva, VC Barbosa, JR Yates III
Bioinformatics 25 (20), 2734-2736, 2009
922009
Improving the TFold test for differential shotgun proteomics
PC Carvalho, JR Yates III, VC Barbosa
Bioinformatics 28 (12), 1652-1654, 2012
832012
PatternLab: from mass spectra to label‐free differential shotgun proteomics
PC Carvalho, JSG Fischer, T Xu, JR Yates III, VC Barbosa
Current Protocols in Bioinformatics 40 (1), 13.19. 1-13.19. 18, 2012
772012
On best practices in the development of bioinformatics software
FV Leprevost, VC Barbosa, EL Francisco, Y Perez-Riverol, PC Carvalho
Frontiers in genetics 5, 97575, 2014
742014
An atlas of edge-reversal dynamics
VC Barbosa
Chapman and Hall/CRC, 2000
692000
V-like formations in flocks of artificial birds
A Nathan, VC Barbosa
Artificial life 14 (2), 179-188, 2008
652008
Massively parallel models of computation: distributed parallel processing in artificial intelligence and optimisation
VC Barbosa
Ellis Horwood, 1993
581993
Characterization of homodimer interfaces with cross-linking mass spectrometry and isotopically labeled proteins
DB Lima, JT Melchior, J Morris, VC Barbosa, J Chamot-Rooke, ...
Nature protocols 13 (3), 431-458, 2018
542018
Finding approximate palindromes in strings
AHL Porto, VC Barbosa
Pattern Recognition 35 (11), 2581-2591, 2002
482002
Generating all the acyclic orientations of an undirected graph
VC Barbosa, JL Szwarcfiter
Information Processing Letters 72 (1-2), 71-74, 1999
451999
A distributed algorithm to find k-dominating sets
LD Penso, VC Barbosa
Discrete Applied Mathematics 141 (1-3), 243-253, 2004
442004
PepExplorer: a similarity-driven tool for analyzing de novo sequencing results
FV Leprevost, RH Valente, DB Lima, J Perales, R Melani, JR Yates, ...
Molecular & Cellular Proteomics 13 (9), 2480-2489, 2014
432014
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