متابعة
Michiel de Hoon
Michiel de Hoon
Team Leader, RIKEN Center for Integrative Medical Sciences
بريد إلكتروني تم التحقق منه على riken.jp
عنوان
عدد مرات الاقتباسات
عدد مرات الاقتباسات
السنة
Biopython: freely available Python tools for computational molecular biology and bioinformatics
PJA Cock, T Antao, JT Chang, BA Chapman, CJ Cox, A Dalke, I Friedberg, ...
Bioinformatics 25 (11), 1422-1423, 2009
48222009
Open source clustering software
MJL de Hoon, S Imoto, J Nolan, S Miyano
Bioinformatics 20 (9), 1453-1454, 2004
33902004
A promoter-level mammalian expression atlas.
Nature 507 (7493), 462-470, 2014
1914*2014
An atlas of human long non-coding RNAs with accurate 5′ ends
CC Hon, JA Ramilowski, J Harshbarger, N Bertin, OJL Rackham, J Gough, ...
Nature 543 (7644), 199-204, 2017
10012017
Gateways to the FANTOM5 promoter level mammalian expression atlas
M Lizio, J Harshbarger, H Shimoji, J Severin, T Kasukawa, S Sahin, ...
Genome biology 16 (1), 1-14, 2015
8382015
Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells
E Arner, CO Daub, K Vitting-Seerup, R Andersson, B Lilje, F Drabløs, ...
Science 347 (6225), 1010-1014, 2015
5982015
Site-specific DICER and DROSHA RNA products control the DNA-damage response
S Francia, F Michelini, A Saxena, D Tang, M de Hoon, V Anelli, M Mione, ...
Nature 488 (7410), 231-235, 2012
5762012
An integrated expression atlas of miRNAs and their promoters in human and mouse
D de Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor, G Åström, ...
Nature Biotechnology 35 (9), 872-878, 2017
5482017
DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information
N Sierro, Y Makita, M de Hoon, K Nakai
Nucleic acids research 36 (suppl_1), D93-D96, 2007
4782007
The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line
H Suzuki, ARR Forrest, E van Nimwegen, CO Daub, PJ Balwierz, ...
Nature genetics 41 (5), 553-562, 2009
4112009
A comprehensive survey of 3′ animal miRNA modification events and a possible role for 3′ adenylation in modulating miRNA targeting effectiveness
AM Burroughs, Y Ando, MJL de Hoon, Y Tomaru, T Nishibu, R Ukekawa, ...
Genome research 20 (10), 1398-1410, 2010
3972010
Deep-sequencing of human Argonaute-associated small RNAs provides insight into miRNA sorting and reveals Argonaute association with RNA fragments of diverse origin
AM Burroughs, Y Ando, ML de Hoon, Y Tomaru, H Suzuki, Y Hayashizaki, ...
RNA biology 8 (1), 158-177, 2011
3512011
Deep transcriptome profiling of mammalian stem cells supports a regulatory role for retrotransposons in pluripotency maintenance
A Fort, K Hashimoto, D Yamada, M Salimullah, CA Keya, A Saxena, ...
Nature genetics 46 (6), 558-566, 2014
3112014
Induction of microRNAs, mir-155, mir-222, mir-424 and mir-503, promotes monocytic differentiation through combinatorial regulation
ARR Forrest, M Kanamori-Katayama, Y Tomaru, T Lassmann, N Ninomiya, ...
Leukemia 24 (2), 460-466, 2010
2872010
Induction of microRNAs, mir-155, mir-222, mir-424 and mir-503, promotes monocytic differentiation through combinatorial regulation
ARR Forrest, M Kanamori-Katayama, Y Tomaru, T Lassmann, N Ninomiya, ...
Leukemia 24 (2), 460-466, 2010
2872010
Inferring gene regulatory networks from time-ordered gene expression data of Bacillus subtilis using differential equations.
MJL De Hoon, S Imoto, K Kobayashi, N Ogasawara, S Miyano
Pacific Symposium on Biocomputing 8, 17-28, 2003
2842003
Hierarchical evolution of the bacterial sporulation network
MJL de Hoon, P Eichenberger, D Vitkup
Current biology 20 (17), R735-R745, 2010
2732010
Prediction of transcriptional terminators in Bacillus subtilis and related species
MJL de Hoon, Y Makita, K Nakai, S Miyano
PLoS computational biology 1 (3), e25, 2005
2412005
Redefinition of the human mast cell transcriptome by deep-CAGE sequencing
E Motakis, S Guhl, Y Ishizu, M Itoh, H Kawaji, M de Hoon, T Lassmann, ...
Blood, The Journal of the American Society of Hematology 123 (17), e58-e67, 2014
2102014
Update of the FANTOM web resource: expansion to provide additional transcriptome atlases
M Lizio, I Abugessaisa, S Noguchi, A Kondo, A Hasegawa, CC Hon, ...
Nucleic acids research 47 (D1), D752-D758, 2018
2002018
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مقالات 1–20