Developing a coarse-grained model for bacterial cell walls: evaluating mechanical properties and free energy barriers R Vaiwala, P Sharma, M Puranik, KG Ayappa Journal of Chemical Theory and Computation 16 (8), 5369-5384, 2020 | 27 | 2020 |
Assessing barriers for antimicrobial penetration in complex asymmetric bacterial membranes: A case study with thymol P Sharma, S Parthasarathi, N Patil, M Waskar, JS Raut, M Puranik, ... Langmuir 36 (30), 8800-8814, 2020 | 27 | 2020 |
Interactions of surfactants with the bacterial cell wall and inner membrane: Revealing the link between aggregation and antimicrobial activity P Sharma, R Vaiwala, S Parthasarathi, N Patil, A Verma, M Waskar, ... Langmuir 38 (50), 15714-15728, 2022 | 20 | 2022 |
A molecular dynamics study of antimicrobial peptide interactions with the lipopolysaccharides of the outer bacterial membrane P Sharma, KG Ayappa The Journal of Membrane Biology 255 (6), 665-675, 2022 | 8* | 2022 |
Differentiating interactions of antimicrobials with Gram-negative and Gram-positive bacterial cell walls using molecular dynamics simulations R Vaiwala, P Sharma, K Ganapathy Ayappa Biointerphases 17 (6), 2022 | 8 | 2022 |
Evaluating coarse-grained MARTINI force-fields for capturing the ripple phase of lipid membranes P Sharma, R Desikan, KG Ayappa The Journal of Physical Chemistry B 125 (24), 6587-6599, 2021 | 8 | 2021 |
Elucidating collective translocation of nanoparticles across the skin lipid matrix: a molecular dynamics study Y Badhe, P Sharma, R Gupta, B Rai Nanoscale Advances 5 (7), 1978-1989, 2023 | 1 | 2023 |
Small Molecule Interactions with Bacterial Cell Membranes: Assessing Insertion Barriers for all the Membranes using Free Energy Computations P Sharma Biophysical Journal 118 (3), 297a, 2020 | 1 | 2020 |
Structure of the Bacterial Cell Envelope and Interactions with Antimicrobials: Insights from Molecular Dynamics Simulations P Sharma, R Vaiwala, AK Gopinath, R Chockalingam, KG Ayappa Langmuir 40 (15), 7791-7811, 2024 | | 2024 |
Molecular Models to Assess Barrier Properties of Bacterial Cell Walls R Vaiwala, P Sharma, G Ayappa 2022 AIChE Annual Meeting, 2022 | | 2022 |
Molecular dynamics investigations of the bacterial cell envelope: Elucidating differential barriers for antimicrobials P Sharma | | 2021 |
Differentiating surfactant interactions with bacterial cell membranes: A combined molecular dynamics and experimental study KGA Pradyumn Sharma, Rakesh Vaiwala, Srividhya Parthasarathi, Nivedita Patil ... Biophysical Society Meeting, 2021 | | 2021 |