متابعة
Amelie Stein
Amelie Stein
Associate Professor, University of Copenhagen
بريد إلكتروني تم التحقق منه على bio.ku.dk
عنوان
عدد مرات الاقتباسات
عدد مرات الاقتباسات
السنة
Macromolecular modeling and design in Rosetta: recent methods and frameworks‏
JK Leman, BD Weitzner, SM Lewis, J Adolf-Bryfogle, N Alam, RF Alford, ...‏
Nature methods 17 (7), 665-680, 2020‏
5682020
A structural biology community assessment of AlphaFold2 applications‏
M Akdel, DEV Pires, EP Pardo, J Jänes, AO Zalevsky, B Mészáros, ...‏
Nature Structural & Molecular Biology 29 (11), 1056-1067, 2022‏
3602022
3did: a catalog of domain-based interactions of known three-dimensional structure‏
R Mosca, A Céol, A Stein, R Olivella, P Aloy‏
Nucleic acids research 42 (D1), D374-D379, 2014‏
2892014
Combined covalent-electrostatic model of hydrogen bonding improves structure prediction with Rosetta‏
MJ O’Meara, A Leaver-Fay, MD Tyka, A Stein, K Houlihan, F DiMaio, ...‏
Journal of chemical theory and computation 11 (2), 609-622, 2015‏
2452015
3did: interacting protein domains of known three-dimensional structure‏
A Stein, RB Russell, P Aloy‏
Nucleic acids research 33 (suppl_1), D413-D417, 2005‏
2362005
Improvements to robotics-inspired conformational sampling in rosetta‏
A Stein, T Kortemme‏
PloS one 8 (5), e63090, 2013‏
2072013
Contextual specificity in peptide-mediated protein interactions‏
A Stein, P Aloy‏
PloS one 3 (7), e2524, 2008‏
1752008
3did: identification and classification of domain-based interactions of known three-dimensional structure‏
A Stein, A Ceol, P Aloy‏
Nucleic acids research 39 (suppl_1), D718-D723, 2010‏
1642010
Structure of the FoxM1 DNA-recognition domain bound to a promoter sequence‏
DR Littler, M Alvarez-Fernandez, A Stein, RG Hibbert, T Heidebrecht, ...‏
Nucleic acids research 38 (13), 4527-4538, 2010‏
1542010
Dynamic interactions of proteins in complex networks: a more structured view‏
A Stein, RA Pache, P Bernado, M Pons, P Aloy‏
The FEBS journal 276 (19), 5390-5405, 2009‏
1352009
Biophysical and mechanistic models for disease-causing protein variants‏
A Stein, DM Fowler, R Hartmann-Petersen, K Lindorff-Larsen‏
Trends in biochemical sciences 44 (7), 575-588, 2019‏
1332019
Three-dimensional modeling of protein interactions and complexes is going ‘omics‏
A Stein, R Mosca, P Aloy‏
Current opinion in structural biology 21 (2), 200-208, 2011‏
1122011
3did Update: domain–domain and peptide-mediated interactions of known 3D structure‏
A Stein, A Panjkovich, P Aloy‏
Nucleic acids research 37 (suppl_1), D300-D304, 2009‏
892009
Predicting the impact of Lynch syndrome-causing missense mutations from structural calculations‏
SV Nielsen, A Stein, AB Dinitzen, E Papaleo, MH Tatham, EG Poulsen, ...‏
PLoS genetics 13 (4), e1006739, 2017‏
862017
Control of protein signaling using a computationally designed GTPase/GEF orthogonal pair‏
GT Kapp, S Liu, A Stein, DT Wong, A Reményi, BJ Yeh, JS Fraser, ...‏
Proceedings of the National Academy of Sciences 109 (14), 5277-5282, 2012‏
862012
Uncovering new substrates for Aurora A kinase‏
T Sardon, RA Pache, A Stein, H Molina, I Vernos, P Aloy‏
EMBO reports 11 (12), 977-984, 2010‏
762010
Novel peptide-mediated interactions derived from high-resolution 3-dimensional structures‏
A Stein, P Aloy‏
PLoS computational biology 6 (5), e1000789, 2010‏
712010
Predicting and interpreting large-scale mutagenesis data using analyses of protein stability and conservation‏
MH Høie, M Cagiada, AHB Frederiksen, A Stein, K Lindorff-Larsen‏
Cell reports 38 (2), 2022‏
672022
Understanding the origins of loss of protein function by analyzing the effects of thousands of variants on activity and abundance‏
M Cagiada, KE Johansson, A Valanciute, SV Nielsen, ...‏
Molecular Biology and Evolution 38 (8), 3235-3246, 2021‏
612021
Toward mechanistic models for genotype–phenotype correlations in phenylketonuria using protein stability calculations‏
R Scheller, A Stein, SV Nielsen, FI Marin, AM Gerdes, M Di Marco, ...‏
Human mutation 40 (4), 444-457, 2019‏
552019
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مقالات 1–20