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James Schnable
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Year
Genome sequencing and analysis of the model grass Brachypodium distachyon
DNA sequencing and assembly Barry Kerrie 5 Lucas Susan 5 Harmon-Smith ...
Nature 463 (7282), 763-768, 2010
18862010
Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss
JC Schnable, NM Springer, M Freeling
Proceedings of the National Academy of Sciences 108 (10), 4069-4074, 2011
7112011
Integration of omic networks in a developmental atlas of maize
JW Walley, RC Sartor, Z Shen, RJ Schmitz, KJ Wu, MA Urich, JR Nery, ...
Science 353 (6301), 814-818, 2016
4072016
ALLMAPS: robust scaffold ordering based on multiple maps
H Tang, X Zhang, C Miao, J Zhang, R Ming, JC Schnable, PS Schnable, ...
Genome biology 16, 1-15, 2015
3382015
Following tetraploidy in maize, a short deletion mechanism removed genes preferentially from one of the two homeologs
MR Woodhouse, JC Schnable, BS Pedersen, E Lyons, D Lisch, ...
PLoS biology 8 (6), e1000409, 2010
3062010
Temporal dynamics of maize plant growth, water use, and leaf water content using automated high throughput RGB and hyperspectral imaging
Y Ge, G Bai, V Stoerger, JC Schnable
Computers and Electronics in Agriculture 127, 625-632, 2016
2902016
High throughput in vivo analysis of plant leaf chemical properties using hyperspectral imaging
P Pandey, Y Ge, V Stoerger, JC Schnable
Frontiers in plant science 8, 259439, 2017
2432017
High-resolution mapping of open chromatin in the rice genome
W Zhang, Y Wu, JC Schnable, Z Zeng, M Freeling, GE Crawford, J Jiang
Genome research 22 (1), 151-162, 2012
2352012
Fractionation mutagenesis and similar consequences of mechanisms removing dispensable or less-expressed DNA in plants
M Freeling, MR Woodhouse, S Subramaniam, G Turco, D Lisch, ...
Current opinion in plant biology 15 (2), 131-139, 2012
2252012
Two evolutionarily distinct classes of paleopolyploidy
O Garsmeur, JC Schnable, A Almeida, C Jourda, A D’Hont, M Freeling
Molecular biology and evolution 31 (2), 448-454, 2014
2042014
Towards a multiscale crop modelling framework for climate change adaptation assessment
B Peng, K Guan, J Tang, EA Ainsworth, S Asseng, CJ Bernacchi, ...
Nature plants 6 (4), 338-348, 2020
1892020
Heritable epigenetic variation among maize inbreds
SR Eichten, RA Swanson-Wagner, JC Schnable, AJ Waters, ...
PLoS Genetics 7 (11), e1002372, 2011
1832011
Altered Patterns of Fractionation and Exon Deletions in Brassica rapa Support a Two-Step Model of Paleohexaploidy
H Tang, MR Woodhouse, F Cheng, JC Schnable, BS Pedersen, G Conant, ...
Genetics 190 (4), 1563-1574, 2012
1812012
Genes identified by visible mutant phenotypes show increased bias toward one of two subgenomes of maize
JC Schnable, M Freeling
PloS one 6 (3), e17855, 2011
1752011
Genome-wide analysis of syntenic gene deletion in the grasses
JC Schnable, M Freeling, E Lyons
Genome biology and evolution 4 (3), 265-277, 2012
1532012
The genome of broomcorn millet
C Zou, L Li, D Miki, D Li, Q Tang, L Xiao, S Rajput, P Deng, LI Peng, W Jia, ...
Nature communications 10 (1), 436, 2019
1462019
Screening synteny blocks in pairwise genome comparisons through integer programming
H Tang, E Lyons, B Pedersen, JC Schnable, AH Paterson, M Freeling
BMC bioinformatics 12, 1-11, 2011
1442011
High-throughput analysis of leaf physiological and chemical traits with VIS–NIR–SWIR spectroscopy: a case study with a maize diversity panel
Y Ge, A Atefi, H Zhang, C Miao, RK Ramamurthy, B Sigmon, J Yang, ...
Plant methods 15, 1-12, 2019
1422019
Genomic resources in plant breeding for sustainable agriculture
M Thudi, R Palakurthi, JC Schnable, A Chitikineni, S Dreisigacker, ...
Journal of Plant Physiology 257, 153351, 2021
1232021
The effect of artificial selection on phenotypic plasticity in maize
JL Gage, D Jarquin, C Romay, A Lorenz, ES Buckler, S Kaeppler, ...
Nature communications 8 (1), 1348, 2017
1232017
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