Jose Rodriguez
Jose Rodriguez
Cardiovascular Proteomics, Spanish National Center for Cardiovascular Research (CNIC)
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عنوانعدد مرات الاقتباساتالسنة
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57-74, 2012
52472012
GENCODE: the reference human genome annotation for The ENCODE Project
J Harrow, A Frankish, JM Gonzalez, E Tapanari, M Diekhans, ...
Genome research 22 (9), 1760-1774, 2012
32192012
A user's guide to the encyclopedia of DNA elements (ENCODE)
ENCODE Project Consortium
PLoS biology 9 (4), 2011
11172011
Multiple evidence strands suggest that there may be as few as 19 000 human protein-coding genes
I Ezkurdia, D Juan, JM Rodriguez, A Frankish, M Diekhans, J Harrow, ...
Human molecular genetics 23 (22), 5866-5878, 2014
4902014
APPRIS: annotation of principal and alternative splice isoforms
JM Rodriguez, P Maietta, I Ezkurdia, A Pietrelli, JJ Wesselink, G Lopez, ...
Nucleic acids research 41 (D1), D110-D117, 2013
1202013
Interoperability with Moby 1.0-it's better than sharing your toothbrush!
M Wilkinson
Nature Precedings, 1-1, 2008
1042008
Comparative proteomics reveals a significant bias toward alternative protein isoforms with conserved structure and function
I Ezkurdia, A del Pozo, A Frankish, JM Rodriguez, J Harrow, K Ashman, ...
Molecular biology and evolution 29 (9), 2265-2283, 2012
752012
Most highly expressed protein-coding genes have a single dominant isoform
I Ezkurdia, JM Rodriguez, E Carrillo-de Santa Pau, J Vázquez, A Valencia, ...
Journal of proteome research 14 (4), 1880-1887, 2015
652015
De Novo Assembly and Functional Annotation of the Olive (Olea europaea) Transcriptome
A Munoz-Mérida, JJ González-Plaza, A Canada, ANAM Blanco, ...
DNA research 20 (1), 93-108, 2013
642013
Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx
F Abascal, A Corvelo, F Cruz, JL Villanueva-Cañas, A Vlasova, ...
Genome biology 17 (1), 1-19, 2016
552016
Alternatively spliced homologous exons have ancient origins and are highly expressed at the protein level
F Abascal, I Ezkurdia, J Rodriguez-Rivas, JM Rodriguez, A del Pozo, ...
PLoS computational biology 11 (6), 2015
472015
The EMBRACE web service collection
S Pettifer, J Ison, M Kalaš, D Thorne, P McDermott, I Jonassen, A Liaquat, ...
Nucleic acids research 38 (suppl_2), W683-W688, 2010
422010
firestar —advances in the prediction of functionally important residues
G Lopez, P Maietta, JM Rodriguez, A Valencia, ML Tress
Nucleic acids research 39 (suppl_2), W235-W241, 2011
412011
APPRIS 2017: principal isoforms for multiple gene sets
JM Rodriguez, J Rodriguez-Rivas, T Di Domenico, J Vázquez, A Valencia, ...
Nucleic acids research 46 (D1), D213-D217, 2018
312018
CARGO: a web portal to integrate customized biological information
I Cases, DG Pisano, E Andres, A Carro, JM Fernández, G Gómez-López, ...
Nucleic acids research 35 (suppl_2), W16-W20, 2007
272007
Loose ends: almost one in five human genes still have unresolved coding status
F Abascal, D Juan, I Jungreis, L Martinez, M Rigau, JM Rodriguez, ...
Nucleic acids research 46 (14), 7070-7084, 2018
212018
APPRIS webserver and webservices
JM Rodriguez, A Carro, A Valencia, ML Tress
Nucleic acids research 43 (W1), W455-W459, 2015
162015
Comprehensive quantification of the modified proteome reveals oxidative heart damage in mitochondrial heteroplasmy
N Bagwan, E Bonzon-Kulichenko, E Calvo, AV Lechuga-Vieco, ...
Cell reports 23 (12), 3685-3697. e4, 2018
152018
The shrinking human protein coding complement: are there now fewer than 20,000 genes?
I Ezkurdia, D Juan, JM Rodriguez, A Frankish, M Diekhans, J Harrow, ...
arXiv preprint arXiv:1312.7111, 2013
152013
PanDrugs: a novel method to prioritize anticancer drug treatments according to individual genomic data
E Piñeiro-Yáñez, M Reboiro-Jato, G Gómez-López, J Perales-Patón, ...
Genome medicine 10 (1), 1-11, 2018
132018
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مقالات 1–20