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Bing Liu
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Oxidized arachidonic and adrenic PEs navigate cells to ferroptosis
VE Kagan, G Mao, F Qu, JPF Angeli, S Doll, CS Croix, HH Dar, B Liu, ...
Nature chemical biology 13 (1), 81-90, 2017
10112017
Redox lipid reprogramming commands susceptibility of macrophages and microglia to ferroptotic death
AA Kapralov, Q Yang, HH Dar, YY Tyurina, TS Anthonymuthu, R Kim, ...
Nature Chemical Biology 16, 278–290, 2020
1422020
A computational and experimental study of the regulatory mechanisms of the complement system
B Liu, J Zhang, PY Tan, D Hsu, AM Blom, B Leong, S Sethi, B Ho, JL Ding, ...
PLoS computational biology 7 (1), e1001059, 2011
682011
Stringent homology-based prediction of H. sapiens-M. tuberculosis H37Rv protein-protein interactions
H Zhou, S Gao, NN Nguyen, M Fan, J Jin, B Liu, L Zhao, G Xiong, M Tan, ...
Biology direct 9 (1), 1-30, 2014
592014
Significance of p53 dynamics in regulating apoptosis in response to ionizing radiation and polypharmacological strategies
B Liu, D Bhatt, ZN Oltvai, JS Greenberger, I Bahar
Scientific Reports 4 (1), 1-12, 2014
432014
Statistical model checking based calibration and analysis of bio-pathway models
SK Palaniappan, BM Gyori, B Liu, D Hsu, PS Thiagarajan
International Conference on Computational Methods in Systems Biology, 120-134, 2013
412013
Quantitative assessment of cell fate decision between autophagy and apoptosis
B Liu, ZN Oltvai, H Bayır, GA Silverman, SC Pak, DH Perlmutter, I Bahar
Scientific Reports 7 (1), 17605, 2017
362017
Innate immune memory and homeostasis may be conferred through crosstalk between the TLR3 and TLR7 pathways
B Liu, Q Liu, L Yang, SK Palaniappan, I Bahar, PS Thiagarajan, JL Ding
Science signaling 9 (436), ra70-ra70, 2016
362016
Rapid community-driven development of a SARS-CoV-2 tissue simulator
M Getz, Y Wang, G An, A Becker, C Cockrell, N Collier, M Craig, CL Davis, ...
BioRxiv, 2020
352020
Caveolin-1 dictates ferroptosis in the execution of acute immune-mediated hepatic damage by attenuating nitrogen stress
G Deng, Y Li, S Ma, Z Gao, T Zeng, L Chen, H Ye, M Yang, H Shi, X Yao, ...
Free Radical Biology and Medicine 148, 151-161, 2020
322020
Probabilistic approximations of ODEs based bio-pathway dynamics
B Liu, D Hsu, PS Thiagarajan
Theoretical Computer Science 412 (21), 2188-2206, 2011
322011
Approximate probabilistic analysis of biopathway dynamics
B Liu, A Hagiescu, SK Palaniappan, B Chattopadhyay, Z Cui, WF Wong, ...
Bioinformatics 28 (11), 1508-1516, 2012
282012
The center for causal discovery of biomedical knowledge from big data
GF Cooper, I Bahar, MJ Becich, PV Benos, J Berg, JU Espino, C Glymour, ...
Journal of the American Medical Informatics Association 22 (6), 1132-1136, 2015
252015
Improved total-body irradiation survival by delivery of two radiation mitigators that target distinct cell death pathways
J Steinman, M Epperly, W Hou, J Willis, H Wang, R Fisher, B Liu, I Bahar, ...
Radiation research 189 (1), 68-83, 2018
242018
Anti-ferroptosis drug enhances total-body irradiation mitigation by drugs that block apoptosis and necroptosis
S Thermozier, W Hou, X Zhang, D Shields, R Fisher, H Bayir, V Kagan, ...
Radiation research 193 (5), 435-450, 2020
232020
Probabilistic approximations of signaling pathway dynamics
B Liu, P Thiagarajan, D Hsu
Computational Methods in Systems Biology, 251-265, 2009
222009
Modeling and analysis of biopathways dynamics
LIU BING, PS Thiagarajan
Journal of Bioinformatics and Computational Biology 10 (04), 2012
212012
Formal modeling and analysis of pancreatic cancer microenvironment
Q Wang, N Miskov-Zivanov, B Liu, JR Faeder, M Lotze, EM Clarke
International Conference on Computational Methods in Systems Biology, 289-305, 2016
202016
A hybrid factored frontier algorithm for dynamic Bayesian networks with a biopathways application
SK Palaniappan, S Akshay, B Liu, B Genest, PS Thiagarajan
IEEE/ACM Transactions on Computational biology and bioinformatics 9 (5 …, 2012
182012
Towards personalized prostate cancer therapy using delta-reachability analysis
B Liu, S Kong, S Gao, P Zuliani, EM Clarke
Proceedings of the 18th International Conference on Hybrid Systems …, 2015
172015
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Articles 1–20