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Nicolas PHILIPPE
Nicolas PHILIPPE
CEO SeqOne, PhD
Verified email at seqone.com - Homepage
Title
Cited by
Cited by
Year
MicroRNAs: new candidates for the regulation of the human cumulus–oocyte complex
S Assou, T Al-Edani, D Haouzi, N Philippe, CH Lecellier, D Piquemal, ...
Human reproduction 28 (11), 3038-3049, 2013
1232013
Long non-coding RNAs in human early embryonic development and their potential in ART
J Bouckenheimer, S Assou, S Riquier, C Hou, N Philippe, C Sansac, ...
Human Reproduction Update 23 (1), 19-40, 2017
902017
CRAC: an integrated approach to the analysis of RNA-seq reads
N Philippe, M Salson, T Commes, E Rivals
Genome biology 14 (3), 1-16, 2013
792013
DE-kupl: exhaustive capture of biological variation in RNA-seq data through k-mer decomposition
J Audoux, N Philippe, R Chikhi, M Salson, M Gallopin, M Gabriel, ...
Genome biology 18 (1), 1-15, 2017
382017
Using reads to annotate the genome: influence of length, background distribution, and sequence errors on prediction capacity
N Philippe, A Boureux, L Bréhélin, J Tarhio, T Commes, É Rivals
Nucleic acids research 37 (15), e104-e104, 2009
262009
Combining DGE and RNA-sequencing data to identify new polyA+ non-coding transcripts in the human genome
N Philippe, E Bou Samra, A Boureux, A Mancheron, F Ruffle, Q Bai, ...
Nucleic Acids Research 42 (5), 2820-2832, 2014
212014
Querying large read collections in main memory: a versatile data structure
N Philippe, M Salson, T Lecroq, M Léonard, T Commes, E Rivals
BMC bioinformatics 12 (1), 242, 2011
182011
New chimeric RNAs in acute myeloid leukemia
F Ruffle, J Audoux, A Boureux, S Beaumeunier, JB Gaillard, EB Samra, ...
F1000Research 6, 2017
102017
SimBA: A methodology and tools for evaluating the performance of RNA-Seq bioinformatic pipelines
J Audoux, M Salson, CF Grosset, S Beaumeunier, JM Holder, T Commes, ...
BMC bioinformatics 18 (1), 1-14, 2017
82017
On the evaluation of the fidelity of supervised classifiers in the prediction of chimeric RNAs
S Beaumeunier, J Audoux, A Boureux, F Ruffle, T Commes, N Philippe, ...
BioData Mining 9 (1), 1-15, 2016
42016
The Role of Machine Learning in Finding Chimeric RNAs
S Beaumeunier, J Audoux, A Boureux, T Commes, N Philippe, R Alves
2015 26th International Workshop on Database and Expert Systems Applications …, 2015
42015
Solid respirometry to characterise the biodegradation kinetics in vertical flow constructed wetland (VFCW): a better insight for modelling
A Morvannou, JM Choubert, N Forquet, N Philippe, M Van Clooster, ...
32010
A scalable indexing solution to mine huge genomic sequence collections
E Rivals, N Philippe, M Salson, M Léonard, T Commes, T Lecroq
ERCIM News 2012 (89), 20-21, 2012
22012
Modelling the long-term evolution of permeability in full-scale municipal MBRs: A multivariate statistical modelling approach
N Philippe, AE Stricker, M Spérandio, PA Vanrolleghem
Procedia Engineering 44, p. 574-p. 580, 2012
22012
Développement de méthodes et d'algorithmes pour la caractérisation et l'annotation des transcriptomes avec les séquenceurs haut débit
N Philippe
Université Montpellier II-Sciences et Techniques du Languedoc, 2011
22011
Genome Alert!: A standardized procedure for genomic variant reinterpretation and automated gene–phenotype reassessment in clinical routine
K Yauy, F Lecoquierre, S Baert-Desurmont, D Trost, A Boughalem, ...
Genetics in Medicine, 2022
12022
Systematic and automated genotype-phenotype associations reassessment through ClinVar follow-up
K Yauy, F Lecoquierre, S Baert-Desurmont, D Trost, A Boughalem, ...
EUROPEAN JOURNAL OF HUMAN GENETICS 30 (SUPPL 1), 490-490, 2022
2022
Predominance of BRCA2 mutation and estrogen receptor-positive breast cancer among BRCA1/2 mutation carriers.
P Pujol, K Yauy, A Coffy, N Duforet-Frebourg, S Gabteni, JP Daurès, ...
2022
Learning phenotypic patterns in genetic disease by symptom interaction modeling
K Yauy, N Duforet-Frebourg, Q Testard, S Beaumeunier, J Audoux, ...
medRxiv, 2022
2022
Predominance of BRCA2 Mutation and Estrogen Receptor Positivity in Unselected Breast Cancer with BRCA1 or BRCA2 Mutation
P Pujol, K Yauy, A Coffy, N Duforet-Frebourg, S Gabteni, JP Daurès, ...
Cancers 14 (13), 3266, 2022
2022
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