Raphael Chaleil
Raphael Chaleil
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عنوان
عدد مرات الاقتباسات
عدد مرات الاقتباسات
السنة
Updates to the integrated protein–protein interaction benchmarks: docking benchmark version 5 and affinity benchmark version 2
T Vreven, IH Moal, A Vangone, BG Pierce, PL Kastritis, M Torchala, ...
Journal of molecular biology 427 (19), 3031-3041, 2015
1692015
SwarmDock: a server for flexible protein–protein docking
M Torchala, IH Moal, RAG Chaleil, J Fernandez-Recio, PA Bates
Bioinformatics 29 (6), 807-809, 2013
1642013
Evolution of enzymes in metabolism: a network perspective
R Alves, RAG Chaleil, MJE Sternberg
Journal of molecular biology 320 (4), 751-770, 2002
1002002
Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: A CASP‐CAPRI experiment
MF Lensink, S Velankar, A Kryshtafovych, SY Huang, ...
Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016
972016
Application of abductive ILP to learning metabolic network inhibition from temporal data
A Tamaddoni-Nezhad, R Chaleil, A Kakas, S Muggleton
Machine Learning 64 (1-3), 209-230, 2006
942006
Implicit flexibility in protein docking: cross‐docking and local refinement
M Król, RAG Chaleil, AL Tournier, PA Bates
Proteins: Structure, Function, and Bioinformatics 69 (4), 750-757, 2007
752007
A simple biophysical model emulates budding yeast chromosome condensation
TMK Cheng, S Heeger, RAG Chaleil, N Matthews, A Stewart, J Wright, ...
Elife 4, e05565, 2015
692015
The γδTCR combines innate immunity with adaptive immunity by utilizing spatially distinct regions for agonist selection and antigen responsiveness
PVACH Daisy Melandri, Iva Zlatareva, Raphaël A. G. Chaleil, Robin J. Dart ...
Nature Immunology, 2018
492018
A Markov‐chain model description of binding funnels to enhance the ranking of docked solutions
M Torchala, IH Moal, RAG Chaleil, R Agius, PA Bates
Proteins: Structure, Function, and Bioinformatics 81 (12), 2143-2149, 2013
242013
Modeling the effects of toxins in metabolic networks
A Tamaddoni-Nezhad, R Chaleil, AC Kakas, M Sternberg, J Nicholson, ...
IEEE Engineering in Medicine and Biology Magazine 26 (2), 37, 2007
162007
A machine learning approach for ranking clusters of docked protein‐protein complexes by pairwise cluster comparison
E Pfeiffenberger, RAG Chaleil, IH Moal, PA Bates
Proteins: Structure, Function, and Bioinformatics 85 (3), 528-543, 2017
112017
Blind prediction of homo‐and hetero‐protein complexes: The CASP13‐CAPRI experiment
MF Lensink, G Brysbaert, N Nadzirin, S Velankar, RAG Chaleil, T Gerguri, ...
Proteins: Structure, Function, and Bioinformatics 87 (12), 1200-1221, 2019
102019
Abduction and induction for learning models of inhibition in metabolic networks
A Tamaddoni-Nezhad, R Chaleil, A Kakas, S Muggleton
Fourth International Conference on Machine Learning and Applications (ICMLA …, 2005
72005
Butyrophilin-2A1 Directly Binds Germline-Encoded Regions of the Vγ9Vδ2 TCR and Is Essential for Phosphoantigen Sensing
MM Karunakaran, CR Willcox, M Salim, D Paletta, AS Fichtner, A Noll, ...
Immunity, 2020
62020
Flexible protein-protein docking with SwarmDock
IH Moal, RAG Chaleil, PA Bates
Protein Complex Assembly, 413-428, 2018
52018
Two-stage Bayesian networks for metabolic network prediction
JW Bang, R Chaleil, J Williamson
Proceedings of the Workshop on Qualitative and Model-Based Reasoning in …, 2003
52003
Abduction and induction for modelling inhibition in metabolic networks
A Tamaddoni-Nezhad, R Chaleil, A Kakas, S Muggleton
Proceedings of the International Workshop on the Integration of Abduction …, 2004
22004
Optimisation of a molecular dynamics simulation of chromosome condensation
TR Law, J Hancox, TMK Cheng, RAG Chaleil, SA Wright, PA Bates, ...
2016 28th International Symposium on Computer Architecture and High …, 2016
12016
Enhanced sampling of protein conformational states for dynamic cross‐docking within the protein‐protein docking server SwarmDock
M Torchala, T Gerguri, RAG Chaleil, P Gordon, F Russell, M Keshani, ...
Proteins: Structure, Function, and Bioinformatics, 2019
2019
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مقالات 1–19