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Avinash Mishra
Avinash Mishra
Verified email at iitd.ac.in
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ProTSAV: A protein tertiary structure analysis and validation server
A Singh, R Kaushik, A Mishra, A Shanker, B Jayaram
Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1864 (1), 11-19, 2016
692016
Efficient toxicity prediction via simple features using shallow neural networks and decision trees
A Karim, A Mishra, MAH Newton, A Sattar
Acs Omega 4 (1), 1874-1888, 2019
662019
Bhageerath-H: A homology/ab initio hybrid server for predicting tertiary structures of monomeric soluble proteins
B Jayaram, P Dhingra, A Mishra, R Kaushik, G Mukherjee, A Singh, ...
BMC bioinformatics 15, 1-12, 2014
572014
RNA dependent RNA polymerase (RdRp) as a drug target for SARS-CoV2
A Mishra, AS Rathore
Journal of Biomolecular Structure and Dynamics 40 (13), 6039-6051, 2022
422022
Toxicity prediction by multimodal deep learning
A Karim, J Singh, A Mishra, A Dehzangi, MAH Newton, A Sattar
Knowledge Management and Acquisition for Intelligent Systems: 16th Pacific …, 2019
252019
Capturing native/native like structures with a physico-chemical metric (pcSM) in protein folding
A Mishra, S Rao, A Mittal, B Jayaram
Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1834 (8), 1520-1531, 2013
252013
Role of solvent accessibility for aggregation-prone patches in protein folding
A Mishra, S Ranganathan, B Jayaram, A Sattar
Scientific reports 8 (1), 12896, 2018
232018
Quantitative toxicity prediction via meta ensembling of multitask deep learning models
A Karim, V Riahi, A Mishra, MAH Newton, A Dehzangi, T Balle, A Sattar
ACS omega 6 (18), 12306-12317, 2021
222021
Dimerization of SARS-CoV-2 nucleocapsid protein affects sensitivity of ELISA based diagnostics of COVID-19
WH Khan, N Khan, A Mishra, S Gupta, V Bansode, D Mehta, R Bhambure, ...
International Journal of Biological Macromolecules 200, 428-437, 2022
212022
D2N: Distance to the native
A Mishra, PS Rana, A Mittal, B Jayaram
Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1844 (10), 1798-1807, 2014
202014
Understanding the mechanism of copurification of “difficult to remove” host cell proteins in rituximab biosimilar products
SK Singh, A Mishra, D Yadav, N Budholiya, AS Rathore
Biotechnology progress 36 (2), e2936, 2020
192020
Machine Learning Interpretability: A Science rather than a tool
A Karim, A Mishra, MA Newton, A Sattar
arXiv preprint arXiv:1807.06722, 2018
152018
Structure-based design of small peptide ligands to inhibit early-stage protein aggregation nucleation
A Mishra, R Bansal, S Sreenivasan, R Dash, S Joshi, R Singh, ...
Journal of Chemical Information and Modeling 60 (6), 3304-3314, 2020
122020
Synergistic effects of natural compounds toward inhibition of SARS-CoV-2 3CL protease
A Mishra, WH Khan, AS Rathore
Journal of chemical information and modeling 61 (11), 5708-5718, 2021
82021
Pharmacophore screening to identify natural origin compounds to target RNA-dependent RNA polymerase (RdRp) of SARS-CoV2
A Mishra, AS Rathore
Molecular Diversity, 1-17, 2022
52022
Modulation of granulocyte colony stimulating factor conformation and receptor binding by methionine oxidation
SK Singh, A Mishra, G Goel, N Chirmule, AS Rathore
Proteins: Structure, Function, and Bioinformatics 89 (1), 68-80, 2021
32021
Identification of a novel scaffold for inhibition of dipeptidyl peptidase-4
A Mishra, M Cross, A Hofmann, MJ Coster, A Karim, A Sattar
Journal of Computational Biology 26 (12), 1470-1486, 2019
32019
107 Genomes to hit molecules In Silico: a country path today, a highway tomorrow: a case study of Chikungunya
A Soni, P Dhingra, A Mishra, T Singh, G Mukherjee, B Jayaram
Journal of Biomolecular Structure and Dynamics 31 (sup1), 67-68, 2013
12013
UNIVERSALITIES IN PROTEIN TERTIARY STRUCTURES: SOME NEW CONCEPTS
B Jayaram, A MITTAL, A MISHRA, C ACHARYA, G KHANDELWAL
Biomolecular Forms and Functions: A Celebration of 50 Years of the …, 2013
12013
Identifying potential compounds from Bacopa monnieri (brahmi) against coxsackievirus A16 RdRp targeting HFM disease (tomato flu)
P Punia, A Prajapati, P Maitra, A Mishra
Medicine in Novel Technology and Devices 20, 100270, 2023
2023
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