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Kelli F. Johnson
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Looking in the rear-view mirror: bias and retrospective patterns in integrated, age-structured stock assessment models
F Hurtado-Ferro, CS Szuwalski, JL Valero, SC Anderson, CJ Cunningham, ...
ICES Journal of Marine Science 72 (1), 99-110, 2015
1812015
Time-varying natural mortality in fisheries stock assessment models: identifying a default approach
KF Johnson, CC Monnahan, CR McGilliard, KA Vert-Pre, SC Anderson, ...
ICES Journal of Marine Science 72 (1), 137-150, 2015
1162015
Exploring the implications of the harvest control rule for Pacific sardine, accounting for predator dynamics: A MICE model
AE Punt, AD MacCall, TE Essington, TB Francis, F Hurtado-Ferro, ...
Ecological Modelling 337, 79-95, 2016
792016
Model-based estimates of effective sample size in stock assessment models using the Dirichlet-multinomial distribution
JT Thorson, KF Johnson, RD Methot, IG Taylor
Fisheries Research 192, 84-93, 2017
772017
A cookbook for using model diagnostics in integrated stock assessments
F Carvalho, H Winker, D Courtney, M Kapur, L Kell, M Cardinale, ...
Fisheries Research 240, 105959, 2021
722021
The importance of length and age composition data in statistical age-structured models for marine species
K Ono, R Licandeo, ML Muradian, CJ Cunningham, SC Anderson, ...
ICES Journal of Marine Science 72 (1), 31-43, 2015
722015
Unraveling the recruitment problem: A review of environmentally-informed forecasting and management strategy evaluation
MA Haltuch, EN Brooks, J Brodziak, JA Devine, KF Johnson, N Klibansky, ...
Fisheries Research 217, 198-216, 2019
652019
Ocean futures under ocean acidification, marine protection, and changing fishing pressures explored using a worldwide suite of ecosystem models
E Olsen, IC Kaplan, C Ainsworth, G Fay, S Gaichas, R Gamble, R Girardin, ...
Frontiers in Marine Science 5, 64, 2018
562018
Can autocorrelated recruitment be estimated using integrated assessment models and how does it affect population forecasts?
KF Johnson, E Councill, JT Thorson, E Brooks, RD Methot, AE Punt
Fisheries Research 183, 222-232, 2016
412016
A multi-model approach to understanding the role of Pacific sardine in the California Current food web
IC Kaplan, TB Francis, AE Punt, LE Koehn, E Curchitser, F Hurtado-Ferro, ...
Marine Ecology Progress Series 617, 307-321, 2019
382019
ss3sim: an R package for fisheries stock assessment simulation with Stock Synthesis
SC Anderson, CC Monnahan, KF Johnson, K Ono, JL Valero
PLoS One 9 (4), e92725, 2014
372014
Status of the US sablefish resource in 2015
KF Johnson, MB Rudd, M Pons, CA Akselrud, Q Lee, F Hurtado-Ferro, ...
Pacific Fisheries Management Council, Portland, OR, 2016
282016
Considerations for management strategy evaluation for small pelagic fishes
MC Siple, LE Koehn, KF Johnson, AE Punt, TM Canales, P Carpi, ...
Fish and Fisheries 22 (6), 1167-1186, 2021
272021
Beyond visualizing catch-at-age models: Lessons learned from the r4ss package about software to support stock assessments
IG Taylor, KL Doering, KF Johnson, CR Wetzel, IJ Stewart
Fisheries Research 239, 105924, 2021
232021
Operationalizing ensemble models for scientific advice to fisheries management
E Jardim, M Azevedo, J Brodziak, EN Brooks, KF Johnson, N Klibansky, ...
ICES Journal of Marine Science 78 (4), 1209-1216, 2021
222021
Status of Pacific ocean perch (Sebastes alutus) along the US west coast in 2017
CR Wetzel, L Cronin-Fine, KF Johnson
Pacific Fishery Management Council 7700, 97220, 2017
192017
How does growth misspecification affect management advice derived from an integrated fisheries stock assessment model?
CC Stawitz, MA Haltuch, KF Johnson
Fisheries Research 213, 12-21, 2019
172019
An empirical weight-at-age approach reduces estimation bias compared to modeling parametric growth in integrated, statistical stock assessment models when growth is time varying
PT Kuriyama, K Ono, F Hurtado-Ferro, AC Hicks, IG Taylor, RR Licandeo, ...
Fisheries Research 180, 119-127, 2016
172016
Status of the sablefish stock in US waters in 2019
MA Haltuch, KF Johnson, N Tolimieri, MS Kapur, CA Castillo-Jordán
Pacific Fisheries Management Council, Portland, OR 7700, 2019
162019
The effect of length bin width on growth estimation in integrated age-structured stock assessments
CC Monnahan, K Ono, SC Anderson, MB Rudd, AC Hicks, ...
Fisheries Research 180, 103-112, 2016
162016
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