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Yi Chen
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Implementation of nationwide real-time whole-genome sequencing to enhance listeriosis outbreak detection and investigation
BR Jackson, C Tarr, E Strain, KA Jackson, A Conrad, H Carleton, LS Katz, ...
Reviews of Infectious Diseases 63 (3), 380-386, 2016
2722016
Multi-virulence-locus sequence typing identifies single nucleotide polymorphisms which differentiate epidemic clones and outbreak strains of Listeria monocytogenes
Y Chen, W Zhang, SJ Knabel
Journal of clinical microbiology 45 (3), 835-846, 2007
2162007
Multiplex PCR for simultaneous detection of bacteria of the genus Listeria, Listeria monocytogenes, and major serotypes and epidemic clones of L. monocytogenes
Y Chen, SJ Knabel
Applied and environmental microbiology 73 (19), 6299-6304, 2007
1742007
comK prophage junction fragments as markers for Listeria monocytogenes genotypes unique to individual meat and poultry processing plants and a model for rapid niche-specific …
B Verghese, M Lok, J Wen, V Alessandria, Y Chen, S Kathariou, S Knabel
Applied and environmental microbiology 77 (10), 3279-3292, 2011
1432011
Novel epidemic clones of Listeria monocytogenes, United States, 2011
S Lomonaco, B Verghese, P Gerner-Smidt, C Tarr, L Gladney, L Joseph, ...
Emerging infectious diseases 19 (1), 147, 2013
1252013
Infectious Dose of Listeria monocytogenes in Outbreak Linked to Ice Cream, United States, 2015
R Pouillot, K Klontz, Y Chen, L Burall, D Macarisin, M Doyle, K Bally, ...
Emerging Infectious Disease 22 (12), 2016
1182016
Enrichment dynamics of Listeria monocytogenes and the associated microbiome from naturally contaminated ice cream linked to a listeriosis outbreak
A Ottesen, P Ramachandran, E Reed, J White, N Hasan, P Subramanian, ...
BMC Microbiology, 275, 2016
1092016
Core genome multilocus sequence typing for identification of globally distributed clonal groups and differentiation of outbreak strains of Listeria monocytogenes
Y Chen, N Gonzalez-Escalona, TS Hammack, M Allard, EA Strain, ...
Applied and Environmental Microbiology 82 (20), 6258-6272, 2016
972016
Molecular subtyping and virulence gene analysis of Listeria monocytogenes isolates from food
J Shen, L Rump, Y Zhang, Y Chen, X Wang, J Meng
Food Microbiology 35 (1), 58-64, 2013
902013
Multi-virulence-locus sequence typing clarifies epidemiology of recent listeriosis outbreaks in the United States
Y Chen, W Zhang, SJ Knabel
Journal of clinical microbiology 43 (10), 5291-5294, 2005
842005
Listeria monocytogenes in Stone Fruits Linked to a Multistate Outbreak: Enumeration of Cells and Whole-Genome Sequencing
Y Chen, LS Burall, Y Luo, R Timme, D Melka, T Muruvanda, J Payne, ...
Applied and Environmental Microbiology, AEM. 01486-16, 2016
77*2016
Method for the isolation and detection of Enterobacter sakazakii (Cronobacter) from powdered infant formula
KA Lampel, Y Chen
International journal of food microbiology 136 (2), 179-184, 2009
722009
Whole Genome and Core Genome Multilocus Sequence Typing and Single Nucleotide Polymorphism Analyses of Listeria monocytogenes Isolates Associated with an Outbreak Linked to …
Y Chen, Y Luo, H Carleton, R Timme, D Melka, T Muruvanda, C Wang, ...
Applied and Environmental Microbiology 83 (15), e00633-17, 2017
662017
Assessing the genome level diversity of Listeria monocytogenes from contaminated ice cream and environmental samples linked to a listeriosis outbreak in the United States
Y Chen, Y Luo, P Curry, R Timme, D Melka, M Doyle, M Parish, ...
PLOS One 12 (2), 2017
632017
Multistate outbreak of listeriosis caused by imported cheese and evidence of cross-contamination of other cheeses, USA, 2012
KE Heiman, VB Garalde, M Gronostaj, KA Jackson, S Beam, L Joseph, ...
Epidemiology & Infection 144 (13), 2698-2708, 2016
622016
BAM: detection and enumeration of Listeria monocytogenes
AD Hitchins, K Jinneman, Y Chen
54*2011
Quasi-metagenomics and realtime sequencing aided detection and subtyping of Salmonella enterica from food samples
JY Hyeon, S Li, DA Mann, S Zhang, Z Li, Y Chen, X Deng
Applied and Environmental Microbiology 84 (4), e02340-17, 2018
492018
An evaluation of alternative methods for constructing phylogenies from whole genome sequence data: a case study with Salmonella
J Pettengill, Y Luo, S Davis, Y Chen, N Gonzalez-Escalona, A Ottesen, ...
PeeJ, 2014
462014
Prevalence and level of Listeria monocytogenes in ice cream linked to a listeriosis outbreak in the United States
Y Chen, LS Burall, D Macarisin, R Pouillot, E Strain, AJ De Jesus, ...
Journal of Food ProtectionŽ 79 (11), 1828-1832, 2016
432016
Development of an improved protocol for the isolation and detection of Enterobacter sakazakii (Cronobacter) from powdered infant formula
YI Chen, KY Song, EW Brown, KA Lampel
Journal of Food ProtectionŽ 73 (6), 1016-1022, 2010
422010
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Articles 1–20