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Yojiro Ishida
Yojiro Ishida
Verified email at stjude.org
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Year
De novo protein design by citizen scientists
B Koepnick, J Flatten, T Husain, A Ford, DA Silva, MJ Bick, A Bauer, G Liu, ...
Nature 570 (7761), 390-394, 2019
1282019
Molecular analysis of antimicrobial resistance in Gram-negative bacteria isolated from fish farms in Egypt
Y Ishida, AM Ahmed, NB Mahfouz, T Kimura, SA El-Khodery, AA Moawad, ...
Journal of Veterinary Medical Science 72 (6), 727-734, 2010
1202010
Genetic basis of multidrug resistance in Salmonella enterica serovars Enteritidis and Typhimurium isolated from diarrheic calves in Egypt
AM Ahmed, EEA Younis, Y Ishida, T Shimamoto
Acta tropica 111 (2), 144-149, 2009
792009
Molecular characterization of antimicrobial resistance in Salmonella isolated from animals in Japan
AM Ahmed, Y Ishida, T Shimamoto
Journal of applied microbiology 106 (2), 402-409, 2009
692009
Genetic analysis of antimicrobial resistance in Escherichia coli isolated from diarrheic neonatal calves
AM Ahmed, EEA Younis, SA Osman, Y Ishida, SA El-Khodery, ...
Veterinary microbiology 136 (3-4), 397-402, 2009
572009
Prevalence and molecular characterization of ampicillin-resistant Enterobacteriaceae isolated from traditional Egyptian Domiati cheese
AM Hammad, Y Ishida, T Shimamoto
Journal of food protection 72 (3), 624-630, 2009
422009
First characterization and emergence of SHV-60 in raw milk of a healthy cow in Japan
AM Hammad, AM Ahmed, Y Ishida, T Shimamoto
Journal of Veterinary Medical Science 70 (11), 1269-1272, 2008
352008
Highly efficient residue-selective labeling with isotope-labeled Ile, Leu, and Val using a new auxotrophic E. coli strain
Y Miyanoiri, Y Ishida, M Takeda, T Terauchi, M Inouye, M Kainosho
Journal of biomolecular NMR 65, 109-119, 2016
332016
Exploiting E. coli auxotrophs for leucine, valine, and threonine specific methyl labeling of large proteins for NMR applications
YR Monneau, Y Ishida, P Rossi, T Saio, SR Tzeng, M Inouye, ...
Journal of biomolecular NMR 65, 99-108, 2016
332016
Assessment of prediction methods for protein structures determined by NMR in CASP14: Impact of AlphaFold2
YJ Huang, N Zhang, B Bersch, K Fidelis, M Inouye, Y Ishida, ...
Proteins: Structure, Function, and Bioinformatics 89 (12), 1959-1976, 2021
302021
Replacement of all arginine residues with canavanine in MazF-bs mRNA interferase changes its specificity
Y Ishida, JH Park, L Mao, Y Yamaguchi, M Inouye
Journal of Biological Chemistry 288 (11), 7564-7571, 2013
232013
Protein structure prediction assisted with sparse NMR data in CASP13
D Sala, YJ Huang, CA Cole, DA Snyder, G Liu, Y Ishida, GVT Swapna, ...
Proteins: Structure, Function, and Bioinformatics 87 (12), 1315-1332, 2019
202019
Toolkit for NMR studies of methyl-labeled proteins
P Rossi, YR Monneau, Y Xia, Y Ishida, CG Kalodimos
Methods in Enzymology 614, 107-142, 2019
202019
Attenuation of postprandial blood glucose in humans consuming isomaltodextrin: carbohydrate loading studies
T Sadakiyo, Y Ishida, S Inoue, Y Taniguchi, T Sakurai, R Takagaki, ...
Food & nutrition research, 2017
172017
Effect of berberine on PPARalpha/delta/gamma expression in type 2 diabetic rat retinae.
JY Zhou, SW Zhou
Yao xue xue bao= Acta Pharmaceutica Sinica 42 (12), 1243-1249, 2007
162007
Evolution of the genetic code; Evidence from serine codon use disparity in Escherichia coli
M Inouye, R Takino, Y Ishida, K Inouye
Proceedings of the National Academy of Sciences 117 (46), 28572-28575, 2020
142020
Effects of isomaltodextrin in postprandial lipid kinetics: Rat study and human randomized crossover study
R Takagaki, Y Ishida, T Sadakiyo, Y Taniguchi, T Sakurai, H Mitsuzumi, ...
PLoS One 13 (5), e0196802, 2018
132018
Characterization of YjjJ toxin of Escherichia coli
Y Maeda, CY Lin, Y Ishida, M Inouye, Y Yamaguchi, S Phadtare
FEMS microbiology letters 364 (11), fnx086, 2017
132017
Indusyunic medicine, Traditional medicine of Herbal, Animal and mineral origin in Pakistan
K Khan, A Saeed, MT Alam
University of Karachi, 1997
121997
Combining evolutionary covariance and nmr data for protein structure determination
YJ Huang, KP Brock, Y Ishida, GVT Swapna, M Inouye, DS Marks, ...
Methods in enzymology 614, 363-392, 2019
102019
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