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Nicolas Coudray
Nicolas Coudray
Verified email at nyumc.org
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Cited by
Cited by
Year
Classification and mutation prediction from non–small cell lung cancer histopathology images using deep learning
N Coudray*, PS Ocampo*, T Sakellaropoulos, N Narula, M Snuderl, ...
Nature medicine 24 (10), 1559, 2018
24632018
Using Machine Learning Algorithms to Predict Immunotherapy Response in Patients with Advanced Melanoma
P Johannet*, N Coudray*, DM Donnelly, G Jour, I Illa-Bochaca, Y Xia, ...
Clinical Cancer Research 27 (1), 131-140, 2021
1322021
Inward-facing conformation of the zinc transporter YiiP revealed by cryoelectron microscopy
N Coudray, S Valvo, M Hu, R Lasala, C Kim, M Vink, M Zhou, D Provasi, ...
Proceedings of the National Academy of Sciences 110 (6), 2140-2145, 2013
1232013
Robust threshold estimation for images with unimodal histograms
N Coudray, JL Buessler, JP Urban
Pattern Recognition Letters 31 (9), 1010-1019, 2010
752010
Structural basis for the alternating access mechanism of the cation diffusion facilitator YiiP
ML Lopez-Redondo*, N Coudray*, Z Zhang, J Alexopoulos, DL Stokes
Proceedings of the National Academy of Sciences 115 (12), 3042-3047, 2018
632018
LetB Structure Reveals a Tunnel for Lipid Transport across the Bacterial Envelope
GL Isom*, N Coudray*, MR MacRae, CT McManus, DC Ekiert, G Bhabha
Cell 181 (3), 653-664. e19, 2020
582020
The transition state and regulation of γ-TuRC-mediated microtubule nucleation revealed by single molecule microscopy
A Thawani, MJ Rale, N Coudray, G Bhabha, HA Stone, JW Shaevitz, ...
ELife 9, e54253, 2020
572020
Structure of bacterial phospholipid transporter MlaFEDB with substrate bound
N Coudray*, GL Isom*, MR MacRae*, MN Saiduddin, G Bhabha, ...
eLife 9, e62518, 2020
552020
Density measurement of fine aerosol fractions from wood combustion sources using ELPI distributions and image processing techniques
N Coudray, A Dieterlen, E Roth, G Trouvé
Fuel 88 (5), 947-954, 2009
492009
Structure of the radial spoke head and insights into its role in mechanoregulation of ciliary beating
I Grossman-Haham, N Coudray, Z Yu, F Wang, N Zhang, G Bhabha, ...
Nature Structural & Molecular Biology 28 (1), 20-28, 2021
482021
A deep learning approach for rapid mutational screening in melanoma
RH Kim, S Nomikou, N Coudray, G Jour, Z Dawood, R Hong, E Esteva, ...
BioRxiv, 610311, 2019
462019
Automated screening of 2D crystallization trials using transmission electron microscopy: a high-throughput tool-chain for sample preparation and microscopic analysis
N Coudray, G Hermann, D Caujolle-Bert, A Karathanou, F Erne-Brand, ...
Journal of structural biology 173 (2), 365-374, 2011
402011
Structure of the SLC4 transporter Bor1p in an inward‐facing conformation
N Coudray, S L Seyler, R Lasala, Z Zhang, KM Clark, ME Dumont, ...
Protein Science 26 (1), 130-145, 2017
382017
Deep learning links histology, molecular signatures and prognosis in cancer
N Coudray, A Tsirigos
Nature Cancer 1 (8), 755-757, 2020
372020
Structure of MlaFB uncovers novel mechanisms of ABC transporter regulation
LR Kolich*, YT Chang*, N Coudray*, SI Giacometti, MR MacRae, GL Isom, ...
Elife 9, e60030, 2020
362020
HEAL: an automated deep learning framework for cancer histopathology image analysis
Y Wang, N Coudray, Y Zhao, F Li, C Hu, YZ Zhang, S Imoto, A Tsirigos, ...
Bioinformatics 37 (22), 4291-4295, 2021
292021
Deep learning and pathomics analyses reveal cell nuclei as important features for mutation prediction of BRAF-mutated melanomas
RH Kim*, S Nomikou*, N Coudray, G Jour, Z Dawood, R Hong, E Esteva, ...
Journal of Investigative Dermatology, 2021
292021
Coupling of ATPase activity, microtubule binding, and mechanics in the dynein motor domain
S Niekamp, N Coudray, N Zhang, RD Vale, G Bhabha
The EMBO journal, 2019
272019
Multi-resolution approach for fine structure extraction: Application and validation on road images
N Coudray, A Karathanou, S Chambon
International Joint Conference on Computer Vision Theory and Applications …, 2010
202010
Efficient pan-cancer whole-slide image classification and outlier detection using convolutional neural networks
S Bilaloglu, J Wu, E Fierro, RD Sanchez, PS Ocampo, N Razavian, ...
bioRxiv, 633123, 2019
182019
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