| Part I: Synthesis, cancer chemopreventive activity and molecular docking study of novel quinoxaline derivatives SA Galal, AS Abdelsamie, H Tokuda, N Suzuki, A Lida, MM ElHefnawi, ... European journal of medicinal chemistry 46 (1), 327-340, 2011 | 65 | 2011 |
| Identification of novel conserved functional motifs across most Influenza A viral strains M ElHefnawi, O AlAidi, N Mohamed, M Kamar, I El-Azab, S Zada, R Siam Virology journal 8 (1), 1-10, 2011 | 55 | 2011 |
| DeNovo: virus-host sequence-based protein–protein interaction prediction FE Eid, M ElHefnawi, LS Heath Bioinformatics 32 (8), 1144-1150, 2016 | 49 | 2016 |
| MysiRNA-designer: a workflow for efficient siRNA design M Mysara, JM Garibaldi, M ElHefnawi PLOS one 6 (10), e25642, 2011 | 43 | 2011 |
| An integrative meta-analysis of microRNAs in hepatocellular carcinoma M ElHefnawi, B Soliman, N Abu-Shahba, M Amer Genomics, proteomics & bioinformatics 11 (6), 354-367, 2013 | 40 | 2013 |
| Comparison of machine learning approaches for prediction of advanced liver fibrosis in chronic hepatitis C patients S Hashem, G Esmat, W Elakel, S Habashy, SA Raouf, M Elhefnawi, ... IEEE/ACM transactions on computational biology and bioinformatics 15 (3 …, 2017 | 38 | 2017 |
| Hsa-miR-195 targets PCMT1 in hepatocellular carcinoma that increases tumor life span M Amer, M Elhefnawi, E El-Ahwany, AF Awad, NA Gawad, S Zada, ... Tumor Biology 35 (11), 11301-11309, 2014 | 33 | 2014 |
| Prediction of prognostic biomarkers for Interferon-based therapy to Hepatitis C Virus patients: a metaanalysis of the NS5A protein in subtypes 1a, 1b, and 3a MM ElHefnawi, S Zada, IA El-Azab Virology journal 7 (1), 1-9, 2010 | 31 | 2010 |
| In silico identification of potential key regulatory factors in smoking-induced lung cancer SA El-Aarag, A Mahmoud, MH Hashem, H Abd Elkader, AE Hemeida, ... BMC medical genomics 10 (1), 1-11, 2017 | 29 | 2017 |
| Genetic distance and heterogenecity between quasispecies is a critical predictor to IFN response in Egyptian patients with HCV genotype-4 ARN Zekri, HMA El-Din, AA Bahnassy, MM Khaled, A Omar, I Fouad, ... Virology journal 4 (1), 1-12, 2007 | 29 | 2007 |
| Modified gold nanoparticles for intracellular delivery of anti-liver cancer siRNA H Shaat, A Mostafa, M Moustafa, A Gamal-Eldeen, A Emam, ... International journal of pharmaceutics 504 (1-2), 125-133, 2016 | 28 | 2016 |
| Multiple virtual screening approaches for finding new Hepatitis c virus RNA-dependent RNA polymerase inhibitors: Structure-based screens and molecular dynamics for the pursue … M ElHefnawi, M ElGamacy, M Fares BMC bioinformatics 13 (17), 1-21, 2012 | 26 | 2012 |
| Accurate prediction of advanced liver fibrosis using the decision tree learning algorithm in chronic hepatitis C Egyptian patients S Hashem, G Esmat, W Elakel, S Habashy, S Abdel Raouf, S Darweesh, ... Gastroenterology research and practice 2016, 2016 | 24 | 2016 |
| MysiRNA: Improving siRNA efficacy prediction using a machine-learning model combining multi-tools and whole stacking energy (ΔG) M Mysara, M Elhefnawi, JM Garibaldi Journal of biomedical informatics 45 (3), 528-534, 2012 | 23 | 2012 |
| Information gain as a feature selection method for the efficient classification of influenza based on viral hosts NA Shaltout, M El-Hefnawi, A Rafea, A Moustafa Proceedings of the world congress on engineering 1 (2014), 625-631, 2014 | 22 | 2014 |
| Synthesis, pharmacological activity evaluation and molecular modeling of new polynuclear heterocyclic compounds containing benzimidazole derivatives FA Bassyouni, TS Saleh, MM ElHefnawi, SI Abd El-Moez, WM El-Senousy, ... Archives of pharmacal research 35 (12), 2063-2075, 2012 | 20 | 2012 |
| The design of optimal therapeutic small interfering RNA molecules targeting diverse strains of influenza A virus M ElHefnawi, N Hassan, M Kamar, R Siam, AL Remoli, I El-Azab, ... Bioinformatics 27 (24), 3364-3370, 2011 | 19 | 2011 |
| Evaluation of computational techniques for predicting non-synonymous single nucleotide variants pathogenicity MS Hassan, AA Shaalan, MI Dessouky, AE Abdelnaiem, M ElHefnawi Genomics 111 (4), 869-882, 2019 | 17 | 2019 |
| Computational identification of tissue-specific splicing regulatory elements in human genes from RNA-Seq data E Badr, M ElHefnawi, LS Heath PLoS One 11 (11), e0166978, 2016 | 17 | 2016 |
| New benzimidazoles and their antitumor effects with aurora A kinase and KSP inhibitory activities AS Abd El‐All, AA Magd‐El‐Din, FAF Ragab, M ElHefnawi, MM Abdalla, ... Archiv der Pharmazie 348 (7), 475-486, 2015 | 14 | 2015 |
