| Epigenetic histone modifications of human transposable elements: genome defense versus exaptation A Huda, L Mariño-Ramírez, IK Jordan Mobile DNA 1, 1-12, 2010 | 85 | 2010 |
| A machine learning model for identifying patients at risk for wild-type transthyretin amyloid cardiomyopathy A Huda, A Castaño, A Niyogi, J Schumacher, M Stewart, M Bruno, M Hu, ... Nature communications 12 (1), 2725, 2021 | 80 | 2021 |
| Epigenetic regulation of transposable element derived human gene promoters A Huda, NJ Bowen, AB Conley, IK Jordan Gene 475 (1), 39-48, 2011 | 58 | 2011 |
| Repetitive DNA elements, nucleosome binding and human gene expression A Huda, L Mariño-Ramírez, D Landsman, IK Jordan Gene 436 (1-2), 12-22, 2009 | 53 | 2009 |
| Endogenous retroviruses of the chicken genome A Huda, N Polavarapu, IK Jordan, JF McDonald Biology Direct 3, 1-5, 2008 | 53 | 2008 |
| A Gibbs sampling strategy applied to the mapping of ambiguous short-sequence tags J Wang, A Huda, VV Lunyak, IK Jordan Bioinformatics 26 (20), 2501-2508, 2010 | 52 | 2010 |
| Epigenetic regulation of mammalian genomes by transposable elements A Huda, IK Jordan Annals of the New York Academy of Sciences 1178 (1), 276-284, 2009 | 52 | 2009 |
| Effect of the transposable element environment of human genes on gene length and expression D Jjingo, A Huda, M Gundapuneni, L Mariño-Ramírez, IK Jordan Genome biology and evolution 3, 259-271, 2011 | 36 | 2011 |
| Prediction of transposable element derived enhancers using chromatin modification profiles A Huda, E Tyagi, L Mariño-Ramírez, NJ Bowen, D Jjingo, IK Jordan PLoS One 6 (11), e27513, 2011 | 34 | 2011 |
| Analysis of transposable element sequences using CENSOR and RepeatMasker A Huda, IK Jordan Bioinformatics for DNA Sequence Analysis, 323-336, 2009 | 29 | 2009 |
| Widespread exonization of transposable elements in human coding sequences is associated with epigenetic regulation of transcription A Huda, PR Bushel Transcriptomics: open access 1 (1), 2013 | 14 | 2013 |
| Population differences in transcript-regulator expression quantitative trait loci PR Bushel, R McGovern, L Liu, O Hofmann, A Huda, J Lu, W Hide, X Lin PLoS One 7 (3), e34286, 2012 | 11 | 2012 |
| Large-scale deep learning analysis to identify adult patients at risk for combined and common variable immunodeficiencies G Papanastasiou, G Yang, DI Fotiadis, N Dikaios, C Wang, A Huda, ... Communications Medicine 3 (1), 189, 2023 | 5 | 2023 |
| Implementing a machine-learning-adapted algorithm to identify possible transthyretin amyloid cardiomyopathy at an academic medical center JD Mitchell, DJ Lenihan, C Reed, A Huda, K Nolen, M Bruno, ... Clinical Medicine Insights: Cardiology 16, 11795468221133608, 2022 | 5 | 2022 |
| A machine learning model for the systematic identification of wild-type transthyretin cardiomyopathy A Huda, SJ Shah, A Castano, A Niyogi, J Schumacher, M Stewart, R Deo Journal of Cardiac Failure 25 (8), S53-S54, 2019 | 5 | 2019 |
| Performance evaluation of a machine learning model for systematic identification of wild-type transthyretin amyloid cardiomyopathy at two academic medical centers S Heitner, MR Elman, A Masri, Y Aphinyanaphongs, A Reyentovich, ... Journal of Cardiac Failure 26 (10), S38, 2020 | 4 | 2020 |
| Detecting transthyretin amyloid cardiomyopathy (ATTR-CM) using machine learning: an evaluation of the performance of an algorithm in a UK setting C Tsang, A Huda, M Norman, C Dickerson, V Leo, J Brownrigg, M Mamas, ... BMJ open 13 (10), e070028, 2023 | 2 | 2023 |
| EstimATTR: A Simplified, Machine-Learning-Based Tool to Predict the Risk of Wild-Type Transthyretin Amyloid Cardiomyopathy A Castaño, SB Heitner, A Masri, A Huda, V Calambur, M Bruno, ... Journal of Cardiac Failure 30 (6), 778-787, 2024 | 1 | 2024 |
| Epigenetic regulation of the human genome by transposable elements A Huda Georgia Institute of Technology, 2010 | 1 | 2010 |
| Ethicara for Responsible AI in Healthcare: A System for Bias Detection and AI Risk Management M Kritharidou, G Chrysogonidis, T Ventouris, V Tsarapastsanis, ... AMIA Annual Symposium Proceedings 2023, 2023, 2024 | | 2024 |
