| A network of human functional gene interactions from knockout fitness screens in cancer cells E Kim, M Dede, WF Lenoir, G Wang, S Srinivasan, M Colic, T Hart Life science alliance 2 (2), 2019 | 86 | 2019 |
| Multiplex enCas12a screens detect functional buffering among paralogs otherwise masked in monogenic Cas9 knockout screens M Dede, M McLaughlin, E Kim, T Hart Genome biology 21, 1-19, 2020 | 79 | 2020 |
| Genome-wide CRISPR screens using isogenic cells reveal vulnerabilities conferred by loss of tumor suppressors X Feng, M Tang, M Dede, D Su, G Pei, D Jiang, C Wang, Z Chen, M Li, ... Science advances 8 (19), eabm6638, 2022 | 21 | 2022 |
| Discovery of putative tumor suppressors from CRISPR screens reveals rewired lipid metabolism in acute myeloid leukemia cells WF Lenoir, M Morgado, PC DeWeirdt, M McLaughlin, AL Griffith, ... Nature communications 12 (1), 1-15, 2021 | 20 | 2021 |
| RNA2DNAlign: nucleotide resolution allele asymmetries through quantitative assessment of RNA and DNA paired sequencing data M Movassagh, N Alomran, P Mudvari, M Dede, C Dede, K Kowsari, ... Nucleic acids research 44 (22), e161-e161, 2016 | 16 | 2016 |
| Safety, efficacy and determinants of response of allogeneic CD19-specific CAR-NK cells in CD19+ B cell tumors: a phase 1/2 trial D Marin, Y Li, R Basar, H Rafei, M Daher, J Dou, V Mohanty, M Dede, ... Nature Medicine, 1-13, 2024 | 13 | 2024 |
| Biases and blind-spots in genome-wide CRISPR knockout screens M Dede, E Kim, T Hart bioRxiv, 2020.01. 16.909606, 2020 | 11 | 2020 |
| Characterizing cancer metabolism from bulk and single-cell RNA-seq data using METAFlux Y Huang, V Mohanty, M Dede, K Tsai, M Daher, L Li, K Rezvani, K Chen Nature communications 14 (1), 4883, 2023 | 9 | 2023 |
| Systematic analysis of actively transcribed core matrisome genes across tissues and cell phenotypes TV Tellman, M Dede, VA Aggarwal, D Salmon, A Naba, ... Matrix Biology 111, 95-107, 2022 | 5 | 2022 |
| Recovering false negatives in CRISPR fitness screens with JLOE M Dede, T Hart Nucleic acids research 51 (4), 1637-1651, 2023 | 2 | 2023 |
| Anthracosis: An unusual cause of vocal fold paralysis S Aydin, O Celebi, M Kiroglu, MG Demir Ear, Nose & Throat Journal 94 (7), 273-275, 2015 | 2 | 2015 |
| Forecasting Acute Kidney Injury and Resource Utilization in ICU patients using longitudinal, multimodal models Y Tan, M Dede, V Mohanty, J Dou, H Hill, E Bernstam, K Chen Journal of Biomedical Informatics, 104648, 2024 | | 2024 |
| Elucidating immune-related gene transcriptional programs via factorization of large-scale RNA profiles S He, V Mohanty, M Gubin, H Rafei, R Basar, M Dede, X Jiang, Y Tan, ... Cancer Research 84 (6_Supplement), 873-873, 2024 | | 2024 |
| Abstract B058: Mutant GNAS drives glycolytic dependency in intraductal papillary mucinous neoplasms of the pancreas Y Makino, K Rajapakshe, N Yee, M Siemann, J Min, BC Selvanesan, ... Cancer Research 84 (2_Supplement), B058-B058, 2024 | | 2024 |
| Metabolic Reprogramming by Mutant GNAS Creates an Actionable Dependency in Intraductal Papillary Mucinous Neoplasms of the Pancreas Y Makino, KI Rajapakshe, BC Selvanesan, T Okumura, K Date, P Dutta, ... bioRxiv, 2024.03. 13.584524, 2024 | | 2024 |
| DAP10 Co-Stimulation Imparts Memory-like Features to CD5 Targeting Cord Blood Derived CAR-NK Cells R Basar, MD Daher, N Uprety, E Ensley, AK Nunez Cortes, S Acharya, ... Blood 142 (Supplement 1), 2089-2089, 2023 | | 2023 |
| Epigenetic Scarring Leads to Irreversible NK Cell Dysfunction in Myeloid Malignancies B Kumar, A Singh, R Basar, N Uprety, Y Li, H Fan, M Shanley, S Acharya, ... Blood 142, 2088, 2023 | | 2023 |
| THE CHOICE OF CO-STIMULATION DETERMINES THE FATE OF CD5 TARGETING CAR-NK CELLS M Daher, R Basar, N Uprety, E Ensley, S Acharya, M Shanley, P Banerjee, ... BONE MARROW TRANSPLANTATION 58 (SUPP 1), 222-222, 2023 | | 2023 |
| Characterizing metabolism from bulk and single-cell RNA-seq data using METAFlux Y Huang, V Mohanty, M Dede, M Daher, L Li, K Rezvani, K Chen bioRxiv, 2022.05. 18.492580, 2022 | | 2022 |
| Discovery of novel putative tumor suppressors from CRISPR screens reveals rewired lipid metabolism in AML cells WF Lenoir, M Morgado, PC DeWeirdt, M McLaughlin, AL Griffith, ... bioRxiv, 2020.10. 08.332023, 2021 | | 2021 |
