متابعة
Jean-François Dufayard
Jean-François Dufayard
Chercheur en génomique comparative et phylogénie, CIRAD, Montpellier
بريد إلكتروني تم التحقق منه على cirad.fr
عنوان
عدد مرات الاقتباسات
عدد مرات الاقتباسات
السنة
New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0‏
S Guindon, JF Dufayard, V Lefort, M Anisimova, W Hordijk, O Gascuel‏
Systematic biology 59 (3), 307-321, 2010‏
173632010
Phylogeny. fr: robust phylogenetic analysis for the non-specialist‏
A Dereeper, V Guignon, G Blanc, S Audic, S Buffet, F Chevenet, ...‏
Nucleic acids research 36 (suppl_2), W465-W469, 2008‏
54542008
Survey of branch support methods demonstrates accuracy, power, and robustness of fast likelihood-based approximation schemes‏
M Anisimova, M Gil, JF Dufayard, C Dessimoz, O Gascuel‏
Systematic biology 60 (5), 685-699, 2011‏
10002011
Estimating maximum likelihood phylogenies with PhyML‏
S Guindon, F Delsuc, JF Dufayard, O Gascuel‏
Bioinformatics for DNA sequence analysis, 113-137, 2009‏
8942009
The genome sequence of the orchid Phalaenopsis equestris‏
J Cai, X Liu, K Vanneste, S Proost, WC Tsai, KW Liu, LJ Chen, Y He, Q Xu, ...‏
Nature genetics 47 (1), 65-72, 2015‏
4932015
Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databases‏
JF Dufayard, L Duret, S Penel, M Gouy, F Rechenmann, G Perrière‏
Bioinformatics 21 (11), 2596-2603, 2005‏
2222005
Databases of homologous gene families for comparative genomics‏
S Penel, AM Arigon, JF Dufayard, AS Sertier, V Daubin, L Duret, M Gouy, ...‏
BMC bioinformatics 10, 1-13, 2009‏
1862009
The banana genome hub‏
G Droc, D Lariviere, V Guignon, N Yahiaoui, D This, O Garsmeur, ...‏
Database 2013, bat035, 2013‏
1762013
Evolutionary dynamics of the leucine-rich repeat receptor-like kinase (LRR-RLK) subfamily in angiosperms‏
I Fischer, A Diévart, G Droc, JF Dufayard, N Chantret‏
Plant physiology 170 (3), 1595-1610, 2016‏
992016
Identification of the Hevea brasiliensisAP2/ERF superfamily by RNA sequencing‏
C Duan, X Argout, V Gébelin, M Summo, JF Dufayard, J Leclercq, ...‏
BMC genomics 14, 1-22, 2013‏
932013
New insights on leucine-rich repeats receptor-like kinase orthologous relationships in angiosperms‏
JF Dufayard, M Bettembourg, I Fischer, G Droc, E Guiderdoni, C Périn, ...‏
Frontiers in Plant Science 8, 243806, 2017‏
802017
PhyML: fast and accurate phylogeny reconstruction by maximum likelihood‏
S Guindon, JF Dufayard, W Hordijk, V Lefort, O Gascuel‏
Infection Genetics and Evolution 9 (3), 384-385, 2009‏
762009
Some ethylene biosynthesis and AP2/ERF genes reveal a specific pattern of expression during somatic embryogenesis in Hevea brasiliensis‏
P Piyatrakul, RA Putranto, F Martin, M Rio, F Dessailly, J Leclercq, ...‏
BMC Plant Biology 12, 1-20, 2012‏
632012
In silico analysis of usher encoding genes in Klebsiella pneumoniae and characterization of their role in adhesion and colonization‏
F Khater, D Balestrino, N Charbonnel, JF Dufayard, S Brisse, C Forestier‏
PloS one 10 (3), e0116215, 2015‏
542015
SNiPlay3: a web-based application for exploration and large scale analyses of genomic variations‏
A Dereeper, F Homa, G Andres, G Sempere, G Sarah, Y Hueber, ...‏
Nucleic Acids Research 43 (W1), W295-W300, 2015‏
512015
Genomicus in 2022: comparative tools for thousands of genomes and reconstructed ancestors‏
NTT Nguyen, P Vincens, JF Dufayard, H Roest Crollius, A Louis‏
Nucleic Acids Research 50 (D1), D1025-D1031, 2022‏
422022
Impact of recurrent gene duplication on adaptation of plant genomes‏
I Fischer, J Dainat, V Ranwez, S Glémin, JF Dufayard, N Chantret‏
BMC Plant Biology 14, 1-15, 2014‏
322014
PlasmoDraft: a database of Plasmodium falciparum gene function predictions based on postgenomic data‏
L Bréhélin, JF Dufayard, O Gascuel‏
BMC bioinformatics 9, 1-15, 2008‏
282008
GreenPhylDB v5: a comparative pangenomic database for plant genomes‏
V Guignon, A Toure, G Droc, JF Dufayard, M Conte, M Rouard‏
Nucleic Acids Research 49 (D1), D1464-D1471, 2021‏
252021
Comprehensive classification of the plant non-specific lipid transfer protein superfamily towards its sequence–structure–function analysis‏
C Fleury, J Gracy, MF Gautier, JL Pons, JF Dufayard, G Labesse, M Ruiz, ...‏
PeerJ 7, e7504, 2019‏
202019
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مقالات 1–20