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Jan Fostier
Jan Fostier
Associate Professor, Ghent University
Verified email at ugent.be
Title
Cited by
Cited by
Year
i-ADHoRe 3.0—fast and sensitive detection of genomic homology in extremely large data sets
S Proost, J Fostier, D De Witte, B Dhoedt, P Demeester, Y Van de Peer, ...
Nucleic acids research 40 (2), e11-e11, 2012
2232012
Halvade: scalable sequence analysis with MapReduce
D Decap, J Reumers, C Herzeel, P Costanza, J Fostier
Bioinformatics 31 (15), 2482-2488, 2015
1052015
Jabba: hybrid error correction for long sequencing reads
G Miclotte, M Heydari, P Demeester, S Rombauts, Y Van de Peer, ...
Algorithms for Molecular Biology 11, 1-12, 2016
952016
An asynchronous parallel MLFMA for scattering at multiple dielectric objects
J Fostier, F Olyslager
IEEE Transactions on Antennas and Propagation 56 (8), 2346-2355, 2008
882008
Evaluation of the impact of Illumina error correction tools on de novo genome assembly
M Heydari, G Miclotte, P Demeester, Y Van de Peer, J Fostier
BMC bioinformatics 18, 1-13, 2017
802017
Computation of Legendre Polynomials and Gauss--Legendre Nodes and Weights for Parallel Computing
I Bogaert, B Michiels, J Fostier
SIAM Journal on Scientific Computing 34 (3), C83-C101, 2012
682012
Full-wave simulations of electromagnetic scattering problems with billions of unknowns
B Michiels, J Fostier, I Bogaert, D De Zutter
IEEE Transactions on Antennas and Propagation 63 (2), 796-799, 2014
662014
Needles: toward large-scale genomic prediction with marker-by-environment interaction
A De Coninck, B De Baets, D Kourounis, F Verbosio, O Schenk, ...
Genetics 203 (1), 543-555, 2016
632016
Frequency-based haplotype reconstruction from deep sequencing data of bacterial populations
S Pulido-Tamayo, A Sánchez-Rodríguez, T Swings, B Van den Bergh, ...
Nucleic acids research 43 (16), e105-e105, 2015
592015
Provably scalable parallel multilevel fast multipole algorithm
J Fostier, F Olyslager
Electronics Letters 44 (19), 1111-1113, 2008
382008
Pathway relevance ranking for tumor samples through network-based data integration
LPC Verbeke, J Van den Eynden, AC Fierro, P Demeester, J Fostier, ...
PloS one 10 (7), e0133503, 2015
372015
A greedy, graph-based algorithm for the alignment of multiple homologous gene lists
J Fostier, S Proost, B Dhoedt, Y Saeys, P Demeester, Y Van de Peer, ...
Bioinformatics 27 (6), 749-756, 2011
372011
Illumina error correction near highly repetitive DNA regions improves de novo genome assembly
M Heydari, G Miclotte, Y Van de Peer, J Fostier
BMC bioinformatics 20, 1-13, 2019
352019
The index-based subgraph matching algorithm (ISMA): fast subgraph enumeration in large networks using optimized search trees
S Demeyer, T Michoel, J Fostier, P Audenaert, M Pickavet, P Demeester
PloS one 8 (4), e61183, 2013
302013
BrownieAligner: accurate alignment of Illumina sequencing data to de Bruijn graphs
M Heydari, G Miclotte, Y Van de Peer, J Fostier
BMC bioinformatics 19, 1-10, 2018
292018
elPrep: high-performance preparation of sequence alignment/map files for variant calling
C Herzeel, P Costanza, D Decap, J Fostier, J Reumers
PLoS One 10 (7), e0132868, 2015
292015
Dynamical anchoring of distant Arrhythmia Sources by Fibrotic Regions via Restructuring of the Activation Pattern
N Vandersickel, M Watanabe, Q Tao, J Fostier, K Zeppenfeld, AV Panfilov
PLoS Computational Biology 14 (12), e1006637, 2018
282018
Weak scalability analysis of the distributed-memory parallel MLFMA
B Michiels, J Fostier, I Bogaert, D De Zutter
IEEE Transactions on Antennas and Propagation 61 (11), 5567-5574, 2013
282013
Full-wave electromagnetic scattering at extremely large 2-D objects
J Fostier, F Olyslager
Electronics letters 45 (5), 245-246, 2009
242009
An open-source implementation for full-wave 2D scattering by million-wavelength-size objects
J Fostier, F Olyslager
IEEE Antennas and Propagation Magazine 52 (5), 23-34, 2010
222010
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