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Marc-Olivier Duceppe
Marc-Olivier Duceppe
Bioinformatician, Canadian Inspection Agency
Verified email at inspection.gc.ca
Title
Cited by
Cited by
Year
The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence
S Eves-van Den Akker, DR Laetsch, P Thorpe, CJ Lilley, EGJ Danchin, ...
Genome biology 17, 1-23, 2016
1812016
Tailoring the specificity of a plant cystatin toward herbivorous insect digestive cysteine proteases by single mutations at positively selected amino acid sites
MC Goulet, C Dallaire, LP Vaillancourt, M Khalf, AM Badri, A Preradov, ...
Plant physiology 146 (3), 1010-1019, 2008
982008
Identification of novel loci associated with maturity and yield traits in early maturity soybean plant introduction lines
TR Copley, MO Duceppe, LS O’Donoughue
BMC genomics 19, 1-12, 2018
552018
Salmonella enterica Prophage Sequence Profiles Reflect Genome Diversity and Can Be Used for High Discrimination Subtyping
W Mottawea, MO Duceppe, AA Dupras, V Usongo, J Jeukens, L Freschi, ...
Frontiers in microbiology 9, 836, 2018
502018
A new method for studying population genetics of cyst nematodes based on Pool‐Seq and genomewide allele frequency analysis
B Mimee, MO Duceppe, PY Véronneau, J Lafond‐Lapalme, M Jean, ...
Molecular Ecology Resources 15 (6), 1356-1365, 2015
482015
Screening for exotic forest pathogens to increase survey capacity using metagenomics
ÉD Tremblay, MO Duceppe, JA Bérubé, T Kimoto, C Lemieux, ...
Phytopathology 108 (12), 1509-1521, 2018
462018
Wounding, insect chewing and phloem sap feeding differentially alter the leaf proteome of potato, Solanum tuberosum L.
MO Duceppe, C Cloutier, D Michaud
Proteome science 10, 1-14, 2012
452012
A new method for decontamination of de novo transcriptomes using a hierarchical clustering algorithm
J Lafond-Lapalme, MO Duceppe, S Wang, P Moffett, B Mimee
Bioinformatics 33 (9), 1293-1300, 2017
342017
High‐resolution biomonitoring of plant pathogens and plant species using metabarcoding of pollen pellet contents collected from a honey bee hive
ÉD Tremblay, MO Duceppe, GB Thurston, MC Gagnon, MJ Côté, ...
Environmental DNA 1 (2), 155-175, 2019
302019
Analysis of survival and hatching transcriptomes from potato cyst nematodes, Globodera rostochiensis and G. pallida
MO Duceppe, J Lafond-Lapalme, JE Palomares-Rius, M Sabeh, V Blok, ...
Scientific reports 7 (1), 3882, 2017
302017
First Report of Soybean Cyst Nematode (Heterodera glycines Ichinohe) on Soybean in the Province of Quebec, Canada
B Mimee, H Peng, V Popovic, Q Yu, MO Duceppe, MP Tétreault, G Belair
Plant Disease 98 (3), 429-429, 2014
302014
Whole-genome sequencing reveals the presence of the bla CTX-M-65 Gene in Extended-Spectrum β-Lactamase-producing and multi-drug-resistant clones of Salmonella serovar Infantis …
E Burnett, M Ishida, S De Janon, S Naushad, MO Duceppe, R Gao, ...
Antibiotics 10 (3), 267, 2021
262021
Assessment of genetic variability of cell wall degradability for the selection of alfalfa with improved saccharification efficiency
MO Duceppe, A Bertrand, S Pattathil, J Miller, Y Castonguay, MG Hahn, ...
Bioenergy research 5, 904-914, 2012
222012
Draft genome sequences of eight Canadian Citrobacter braakii and Citrobacter freundii strains
MO Duceppe, B Phipps-Todd, C Carrillo, H Huang
Microbiology resource announcements 8 (27), 10.1128/mra. 00273-19, 2019
112019
Transcriptome-wide selection of a reliable set of reference genes for gene expression studies in potato cyst nematodes (Globodera spp.)
M Sabeh, MO Duceppe, M St-Arnaud, B Mimee
PLoS One 13 (3), e0193840, 2018
112018
Complete genome sequence of a Canadian Klebsiella michiganensis strain, obtained using Oxford Nanopore Technologies sequencing
M Kang, J Chmara, MO Duceppe, B Phipps-Todd, H Huang
Microbiology Resource Announcements 9 (46), 10.1128/mra. 00960-20, 2020
102020
A comparison of fourteen fully characterized mammalian-associated Campylobacter fetus isolates suggests that loss of defense mechanisms contribute to high genomic plasticity …
SA Nadin-Davis, J Chmara, CD Carrillo, K Amoako, N Goji, MO Duceppe, ...
PeerJ 9, e10586, 2021
82021
A New Whole Genome Culture-Independent Diagnostic Test (WG-CIDT) for Rapid Detection of Salmonella in Lettuce
D Ogunremi, AA Dupras, S Naushad, R Gao, MO Duceppe, K Omidi, ...
Frontiers in Microbiology 11, 602, 2020
82020
Genome sequences of five Mycobacterium bovis strains isolated from farmed animals and wildlife in Canada
O Andrievskaia, MO Duceppe, D Lloyd
Genome Announcements 6 (15), 10.1128/genomea. 00258-18, 2018
72018
Salmonella enterica prophage sequence profiles reflect genome diversity and can be used for high discrimination subtyping. Front Microbiol 9: 836
W Mottawea, MO Duceppe, AA Dupras, V Usongo, J Jeukens, L Freschi, ...
72018
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