Marc-Olivier Duceppe
Marc-Olivier Duceppe
Bioinformatician, Canadian Inspection Agency
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Cited by
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The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence
S Eves-van Den Akker, DR Laetsch, P Thorpe, CJ Lilley, EGJ Danchin, ...
Genome biology 17 (1), 1-23, 2016
Tailoring the specificity of a plant cystatin toward herbivorous insect digestive cysteine proteases by single mutations at positively selected amino acid sites
MC Goulet, C Dallaire, LP Vaillancourt, M Khalf, AM Badri, A Preradov, ...
Plant Physiology 146 (3), 1010-1019, 2008
Identification of novel loci associated with maturity and yield traits in early maturity soybean plant introduction lines
TR Copley, MO Duceppe, LS O’Donoughue
BMC genomics 19, 1-12, 2018
A new method for studying population genetics of cyst nematodes based on Pool‐Seq and genomewide allele frequency analysis
B Mimee, MO Duceppe, PY Véronneau, J Lafond‐Lapalme, M Jean, ...
Molecular Ecology Resources 15 (6), 1356-1365, 2015
Wounding, insect chewing and phloem sap feeding differentially alter the leaf proteome of potato, Solanum tuberosum L.
MO Duceppe, C Cloutier, D Michaud
Proteome science 10, 1-14, 2012
Salmonella enterica Prophage Sequence Profiles Reflect Genome Diversity and Can Be Used for High Discrimination Subtyping
W Mottawea, MO Duceppe, AA Dupras, V Usongo, J Jeukens, L Freschi, ...
Frontiers in microbiology 9, 836, 2018
Screening for exotic forest pathogens to increase survey capacity using metagenomics
ÉD Tremblay, MO Duceppe, JA Bérubé, T Kimoto, C Lemieux, ...
Phytopathology 108 (12), 1509-1521, 2018
A new method for decontamination of de novo transcriptomes using a hierarchical clustering algorithm
J Lafond-Lapalme, MO Duceppe, S Wang, P Moffett, B Mimee
Bioinformatics 33 (9), 1293-1300, 2017
Analysis of survival and hatching transcriptomes from potato cyst nematodes, Globodera rostochiensis and G. pallida
MO Duceppe, J Lafond-Lapalme, JE Palomares-Rius, M Sabeh, V Blok, ...
Scientific reports 7 (1), 3882, 2017
First Report of Soybean Cyst Nematode (Heterodera glycines Ichinohe) on Soybean in the Province of Quebec, Canada
B Mimee, H Peng, V Popovic, Q Yu, MO Duceppe, MP Tétreault, G Belair
Plant Disease 98 (3), 429-429, 2014
High‐resolution biomonitoring of plant pathogens and plant species using metabarcoding of pollen pellet contents collected from a honey bee hive
ÉD Tremblay, MO Duceppe, GB Thurston, MC Gagnon, MJ Côté, ...
Environmental DNA 1 (2), 155-175, 2019
Assessment of genetic variability of cell wall degradability for the selection of alfalfa with improved saccharification efficiency
MO Duceppe, A Bertrand, S Pattathil, J Miller, Y Castonguay, MG Hahn, ...
Bioenergy research 5, 904-914, 2012
Whole-Genome Sequencing Reveals the Presence of the bla CTX-M-65 Gene in Extended-Spectrum β-Lactamase-Producing and Multi-Drug-Resistant Clones of Salmonella Serovar Infantis …
E Burnett, M Ishida, S De Janon, S Naushad, MO Duceppe, R Gao, ...
Antibiotics 10 (3), 267, 2021
Transcriptome-wide selection of a reliable set of reference genes for gene expression studies in potato cyst nematodes (Globodera spp.)
M Sabeh, MO Duceppe, M St-Arnaud, B Mimee
PLoS One 13 (3), e0193840, 2018
Draft genome sequences of eight Canadian Citrobacter braakii and Citrobacter freundii strains
MO Duceppe, B Phipps-Todd, C Carrillo, H Huang
Microbiology resource announcements 8 (27), 10.1128/mra. 00273-19, 2019
Complete genome sequence of a Canadian Klebsiella michiganensis strain, obtained using Oxford Nanopore Technologies sequencing
M Kang, J Chmara, MO Duceppe, B Phipps-Todd, H Huang
Microbiology Resource Announcements 9 (46), 10.1128/mra. 00960-20, 2020
Genome sequences of five Mycobacterium bovis strains isolated from farmed animals and wildlife in Canada
O Andrievskaia, MO Duceppe, D Lloyd
Genome Announcements 6 (15), 10.1128/genomea. 00258-18, 2018
Salmonella enterica prophage sequence profiles reflect genome diversity and can be used for high discrimination subtyping. Front Microbiol 9: 836
W Mottawea, MO Duceppe, AA Dupras, V Usongo, J Jeukens, L Freschi, ...
A New Whole Genome Culture-Independent Diagnostic Test (WG-CIDT) for Rapid Detection of Salmonella in Lettuce
D Ogunremi, AA Dupras, S Naushad, R Gao, MO Duceppe, K Omidi, ...
Frontiers in Microbiology 11, 602, 2020
Identification and temporal distribution of potential insect vectors of Erwinia tracheiphila, the causal agent of bacterial wilt of cucurbits
V Toussaint, M Ciotola, M Cadieux, G Racette, MO Duceppe, B Mimee
Phytopathology 103 (6), 147-147, 2013
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