James L. O'Donnell
James L. O'Donnell
Research Associate, University of Washington
Verified email at uw.edu - Homepage
Cited by
Cited by
Assessing vertebrate biodiversity in a kelp forest ecosystem using environmental DNA
JA Port, JL O'Donnell, OC Romero‐Maraccini, PR Leary, SY Litvin, ...
Molecular ecology 25 (2), 527-541, 2016
Spatial distribution of environmental DNA in a nearshore marine habitat
JL O’Donnell, RP Kelly, AO Shelton, JF Samhouri, NC Lowell, ...
PeerJ 5, e3044, 2017
Indexed PCR primers induce template-specific bias in large-scale DNA sequencing studies
JL O’Donnell, RP Kelly, NC Lowell, JA Port
PloS one 11 (3), e0148698, 2016
Genetic and manual survey methods yield different and complementary views of an ecosystem
RP Kelly, CJ Closek, JL O'Donnell, JE Kralj, AO Shelton, JF Samhouri
Frontiers in Marine Science 3, 283, 2017
Genetic signatures of ecological diversity along an urbanization gradient
RP Kelly, JL O’Donnell, NC Lowell, AO Shelton, JF Samhouri, ...
PeerJ 4, e2444, 2016
A framework for inferring biological communities from environmental DNA
AO Shelton, JL O'Donnell, JF Samhouri, N Lowell, GD Williams, RP Kelly
Ecological Applications 26 (6), 1645-1659, 2016
taxize: Taxonomic information from around the web
S Chamberlain, E Szocs, C Boettiger, K Ram, I Bartomeus, J Baumgartner, ...
R package version 0.3. 0, 2014
Indirect effects of a key ecosystem engineer alter survival and growth of foundation coral species
JSS White, JL O'Donnell
Ecology 91 (12), 3538-3548, 2010
Environmental DNA provides quantitative estimates of a threatened salmon species
AO Shelton, RP Kelly, JL O'Donnell, L Park, P Schwenke, C Greene, ...
Biological Conservation 237, 383-391, 2019
Ghosts of thermal past: reef fish exposed to historic high temperatures have heightened stress response to further stressors
SC Mills, R Beldade, P Chabanet, L Bigot, JL O’donnell, G Bernardi
Coral Reefs 34 (4), 1255-1260, 2015
Environmental DNA survey captures patterns of fish and invertebrate diversity across a tropical seascape
BN Nguyen, EW Shen, J Seemann, AMS Correa, JL O’Donnell, AH Altieri, ...
Scientific reports 10 (1), 1-14, 2020
Life history, larval dispersal, and connectivity in coral reef fish among the Scattered Islands of the Mozambique Channel
JL O’Donnell, R Beldade, SC Mills, HE Williams, G Bernardi
Coral Reefs 36 (1), 223-232, 2017
Revealing biases in the sampling of ecological interaction networks
MAM de Aguiar, EA Newman, MM Pires, JD Yeakel, C Boettiger, ...
PeerJ 7, e7566, 2019
Natural endocrine profiles of the group‐living skunk anemonefish Amphiprion akallopisos in relation to their size‐based dominance hierarchy
SC Mills, JL O'Donnell, G Bernardi, R Beldade
Journal of fish biology 92 (3), 773-789, 2018
Variation in partner benefits in a shrimp—sea anemone symbiosis
CS McKeon, JL O’Donnell
PeerJ 3, e1409, 2015
The indirect paths to cascading effects of extinctions in mutualistic networks
MM Pires, JL O'Donnell, LA Burkle, C Díaz‐Castelazo, DH Hembry, ...
Ecology, e03080, 2020
Diverse interactions and ecosystem engineering can stabilize community assembly
JD Yeakel, MM Pires, MAM de Aguiar, JL O’Donnell, PR Guimarăes, ...
Nature communications 11 (1), 1-10, 2020
Metabarcoding a tropical lagoon: Diversity patterns across habitats, taxa, and body sizes
BN Nguyen, AH Altieri, N Knowlton, G Paulay, RM Lasley, F Michonneau, ...
2019 ESA Annual Meeting (August 11--16), 2019
Quantization of ecological interaction networks yields insights into the fundamental processes underlying community assembly
JD Yeakel, MM Pires, J O’Donnell, MAM de Aguiar, PR Guimaraes, ...
2018 ESA Annual Meeting (August 5--10), 2018
Experimental sampling design interacts strongly with underlying topologies of ecological interaction networks
EA Newman, MAM de Aguiar, MM Pires, JD Yeakel, DH Hembry, ...
2018 ESA Annual Meeting (August 5--10), 2018
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