| Distinct structural transitions of chromatin topological domains correlate with coordinated hormone-induced gene regulation F Le Dily, D Bau, A Pohl, GP Vicent, F Serra, D Soronellas, G Castellano, ... Genes & development 28 (19), 2151-2162, 2014 | 336 | 2014 |
| Transcription factors orchestrate dynamic interplay between genome topology and gene regulation during cell reprogramming R Stadhouders, E Vidal, F Serra, B Di Stefano, F Le Dily, J Quilez, ... Nature genetics 50 (2), 238-249, 2018 | 333 | 2018 |
| ADP-ribose–derived nuclear ATP synthesis by NUDIX5 is required for chromatin remodeling RHG Wright, A Lioutas, F Le Dily, D Soronellas, A Pohl, J Bonet, AS Nacht, ... Science 352 (6290), 1221-1225, 2016 | 164 | 2016 |
| Nucleosome-driven transcription factor binding and gene regulation C Ballaré, G Castellano, L Gaveglia, S Althammer, J González-Vallinas, ... Molecular cell 49 (1), 67-79, 2013 | 153 | 2013 |
| Distinct roles of cohesin-SA1 and cohesin-SA2 in 3D chromosome organization A Kojic, A Cuadrado, M De Koninck, D Giménez-Llorente, ... Nature structural & molecular biology 25 (6), 496-504, 2018 | 144 | 2018 |
| CDK2-dependent activation of PARP-1 is required for hormonal gene regulation in breast cancer cells RHG Wright, G Castellano, J Bonet, F Le Dily, J Font-Mateu, C Ballaré, ... Genes & development 26 (17), 1972-1983, 2012 | 134 | 2012 |
| Differential estrogen-regulation of CXCL12 chemokine receptors, CXCR4 and CXCR7, contributes to the growth effect of estrogens in breast cancer cells A Boudot, G Kerdivel, D Habauzit, J Eeckhoute, F Le Dily, G Flouriot, ... PloS one 6 (6), e20898, 2011 | 133 | 2011 |
| Promoter bivalency favors an open chromatin architecture in embryonic stem cells G Mas, E Blanco, C Ballaré, M Sansó, YG Spill, D Hu, Y Aoi, F Le Dily, ... Nature genetics 50 (10), 1452-1462, 2018 | 126 | 2018 |
| Three-dimensional genomic structure and cohesin occupancy correlate with transcriptional activity during spermatogenesis C Vara, A Paytuví-Gallart, Y Cuartero, F Le Dily, F Garcia, J Salvà-Castro, ... Cell reports 28 (2), 352-367. e9, 2019 | 124 | 2019 |
| CTCF is dispensable for immune cell transdifferentiation but facilitates an acute inflammatory response G Stik, E Vidal, M Barrero, S Cuartero, M Vila-Casadesús, ... Nature genetics 52 (7), 655-661, 2020 | 100 | 2020 |
| Unliganded progesterone receptor-mediated targeting of an RNA-containing repressive complex silences a subset of hormone-inducible genes GP Vicent, AS Nacht, R Zaurin, J Font-Mateu, D Soronellas, F Le Dily, ... Genes & development 27 (10), 1179-1197, 2013 | 89 | 2013 |
| Lamin B1 mapping reveals the existence of dynamic and functional euchromatin lamin B1 domains L Pascual-Reguant, E Blanco, S Galan, F Le Dily, Y Cuartero, ... Nature communications 9 (1), 3420, 2018 | 83 | 2018 |
| Signaling by steroid hormones in the 3D nuclear space F Le Dily, M Beato International journal of molecular sciences 19 (2), 306, 2018 | 76 | 2018 |
| Two chromatin remodeling activities cooperate during activation of hormone responsive promoters GP Vicent, R Zaurin, AS Nacht, A Li, J Font-Mateu, F Le Dily, ... PLoS Genetics 5 (7), e1000567, 2009 | 69 | 2009 |
| Arginine citrullination at the C-terminal domain controls RNA polymerase II transcription P Sharma, A Lioutas, N Fernandez-Fuentes, J Quilez, ... Molecular cell 73 (1), 84-96. e7, 2019 | 62 | 2019 |
| OneD: increasing reproducibility of Hi-C samples with abnormal karyotypes E Vidal, F le Dily, J Quilez, R Stadhouders, Y Cuartero, T Graf, ... Nucleic acids research 46 (8), e49-e49, 2018 | 57 | 2018 |
| Hormone-control regions mediate steroid receptor–dependent genome organization F Le Dily, E Vidal, Y Cuartero, J Quilez, AS Nacht, GP Vicent, ... Genome research 29 (1), 29-39, 2019 | 54 | 2019 |
| Rapid reversible changes in compartments and local chromatin organization revealed by hyperosmotic shock R Amat, R Böttcher, F Le Dily, E Vidal, J Quilez, Y Cuartero, M Beato, ... Genome research 29 (1), 18-28, 2019 | 50 | 2019 |
| ATP, Mg2+, nuclear phase separation, and genome accessibility RHG Wright, F Le Dily, M Beato Trends in biochemical sciences 44 (7), 565-574, 2019 | 45 | 2019 |
| The impact of chromosomal fusions on 3D genome folding and recombination in the germ line C Vara, A Paytuví-Gallart, Y Cuartero, L Álvarez-González, L Marín-Gual, ... Nature communications 12 (1), 2981, 2021 | 42 | 2021 |
