| Interactive microbial genome visualization with GView A Petkau, M Stuart-Edwards, P Stothard, G Van Domselaar Bioinformatics 26 (24), 3125-3126, 2010 | 291 | 2010 |
| Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa AR Reimer, G Van Domselaar, S Stroika, M Walker, H Kent, C Tarr, ... Emerging infectious diseases 17 (11), 2113, 2011 | 181 | 2011 |
| Evolutionary dynamics of Vibrio cholerae O1 following a single-source introduction to Haiti LS Katz, A Petkau, J Beaulaurier, S Tyler, ES Antonova, MA Turnsek, ... MBio 4 (4), e00398-13, 2013 | 134 | 2013 |
| SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology A Petkau, P Mabon, C Sieffert, NC Knox, J Cabral, M Iskander, M Iskander, ... Microbial genomics 3 (6), 2017 | 120 | 2017 |
| A comparative analysis of the Lyve-SET phylogenomics pipeline for genomic epidemiology of foodborne pathogens LS Katz, T Griswold, AJ Williams-Newkirk, D Wagner, A Petkau, C Sieffert, ... Frontiers in Microbiology 8, 375, 2017 | 103 | 2017 |
| Surveillance of Enterococcus spp. reveals distinct species and antimicrobial resistance diversity across a One-Health continuum R Zaheer, SR Cook, R Barbieri, N Goji, A Cameron, A Petkau, RO Polo, ... Scientific reports 10 (1), 1-16, 2020 | 99 | 2020 |
| A primer on infectious disease bacterial genomics T Lynch, A Petkau, N Knox, M Graham, G Van Domselaar Clinical microbiology reviews 29 (4), 881-913, 2016 | 48 | 2016 |
| Genomic insights from whole genome sequencing of four clonal outbreak Campylobacter jejuni assessed within the global C. jejuni population CG Clark, C Berry, M Walker, A Petkau, DOR Barker, C Guan, A Reimer, ... BMC genomics 17 (1), 1-16, 2016 | 37 | 2016 |
| The integrated rapid infectious disease analysis (IRIDA) platform TC Matthews, FR Bristow, EJ Griffiths, A Petkau, J Adam, D Dooley, ... BioRxiv, 381830, 2018 | 25 | 2018 |
| SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology. Microb Genom. 2017; 3: e000116 A Petkau, P Mabon, C Sieffert, NC Knox, J Cabral, M Iskander | 24 | |
| Shared genome analyses of notable listeriosis outbreaks, highlighting the critical importance of epidemiological evidence, input datasets and interpretation criteria A Reimer, K Weedmark, A Petkau, CL Peterson, M Walker, N Knox, ... Microbial genomics 5 (1), 2019 | 15 | 2019 |
| Vibrio cholerae Outbreak Genomics Task Force. 2011. Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa AR Reimer, G Van Domselaar, S Stroika, M Walker, H Kent, C Tarr, ... Emerg. Infect. Dis 17, 2113-2121, 0 | 15 | |
| A multilocus sequence typing scheme for Mycobacterium abscessus complex (MAB-multilocus sequence typing) using whole-genome sequencing data M Wuzinski, AK Bak, A Petkau, WHB Demczuk, H Soualhine, MK Sharma International Journal of Mycobacteriology 8 (3), 273, 2019 | 8 | 2019 |
| Correlation between Phenotypic and In Silico Detection of Antimicrobial Resistance in Salmonella enterica in Canada Using Staramr A Bharat, A Petkau, BP Avery, JC Chen, JP Folster, CA Carson, ... Microorganisms 10 (2), 292, 2022 | 6 | 2022 |
| Sequence database versioning for command line and Galaxy bioinformatics servers DM Dooley, AJ Petkau, G Van Domselaar, WWL Hsiao Bioinformatics 32 (8), 1275-1277, 2016 | 5 | 2016 |
| Investigation of Two Mycobacterium abscessus Outbreaks in Quebec Using Whole Genome Sequencing M Wuzinski, H Soualhine, E Valliere, PM Akochy, N Cloutier, A Petkau, ... BioMed Research International 2020, 2020 | 1 | 2020 |
| CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database BP Alcock, W Huynh, R Chalil, KW Smith, AR Raphenya, MA Wlodarski, ... Nucleic Acids Research, 2022 | | 2022 |
| A framework for the indexing, querying, clustering, and visualization of microbial genomes for surveillance and outbreak investigation A Petkau | | 2022 |
| Outbreak surveillance and investigation using IRIDA and SNVPhyl A Petkau, F Bristow, T Matthews, J Adam, P Mabon, C Sieffert, E Enns, ... F1000Research 5, 2016 | | 2016 |
| Design and implementation of an ontology for public health genomic epidemiology M Courtot, D Dooley, E Griffiths, J Adam, F Bristow, J a Carriço, BK Dhillon, ... F1000Research 5, 2014 | | 2014 |
Gary Van DomselaarNational Microbiology Laboratory, Public Health Agency of CanadaVerified email at phac-aspc.gc.ca
