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Aaron Petkau
Aaron Petkau
National Microbiology Laboratory, Public Health Agency of Canada
Verified email at canada.ca
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Cited by
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Year
Interactive microbial genome visualization with GView
A Petkau, M Stuart-Edwards, P Stothard, G Van Domselaar
Bioinformatics 26 (24), 3125-3126, 2010
2722010
Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa
AR Reimer, G Van Domselaar, S Stroika, M Walker, H Kent, C Tarr, ...
Emerging infectious diseases 17 (11), 2113, 2011
1772011
Evolutionary dynamics of Vibrio cholerae O1 following a single-source introduction to Haiti
LS Katz, A Petkau, J Beaulaurier, S Tyler, ES Antonova, MA Turnsek, ...
MBio 4 (4), e00398-13, 2013
1332013
SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology
A Petkau, P Mabon, C Sieffert, NC Knox, J Cabral, M Iskander, M Iskander, ...
Microbial genomics 3 (6), 2017
1122017
A comparative analysis of the Lyve-SET phylogenomics pipeline for genomic epidemiology of foodborne pathogens
LS Katz, T Griswold, AJ Williams-Newkirk, D Wagner, A Petkau, C Sieffert, ...
Frontiers in Microbiology 8, 375, 2017
962017
Surveillance of Enterococcus spp. reveals distinct species and antimicrobial resistance diversity across a One-Health continuum
R Zaheer, SR Cook, R Barbieri, N Goji, A Cameron, A Petkau, RO Polo, ...
Scientific reports 10 (1), 1-16, 2020
772020
A primer on infectious disease bacterial genomics
T Lynch, A Petkau, N Knox, M Graham, G Van Domselaar
Clinical microbiology reviews 29 (4), 881-913, 2016
462016
Genomic insights from whole genome sequencing of four clonal outbreak Campylobacter jejuni assessed within the global C. jejuni population
CG Clark, C Berry, M Walker, A Petkau, DOR Barker, C Guan, A Reimer, ...
BMC genomics 17 (1), 1-16, 2016
342016
The integrated rapid infectious disease analysis (IRIDA) platform
TC Matthews, FR Bristow, EJ Griffiths, A Petkau, J Adam, D Dooley, ...
BioRxiv, 381830, 2018
242018
SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology. Microb Genom. 2017; 3: e000116
A Petkau, P Mabon, C Sieffert, NC Knox, J Cabral, M Iskander
21
Shared genome analyses of notable listeriosis outbreaks, highlighting the critical importance of epidemiological evidence, input datasets and interpretation criteria
A Reimer, K Weedmark, A Petkau, CL Peterson, M Walker, N Knox, ...
Microbial genomics 5 (1), 2019
152019
Vibrio cholerae Outbreak Genomics Task Force. 2011. Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa
AR Reimer, G Van Domselaar, S Stroika, M Walker, H Kent, C Tarr, ...
Emerg. Infect. Dis 17, 2113-2121, 0
15
A multilocus sequence typing scheme for Mycobacterium abscessus complex (MAB-multilocus sequence typing) using whole-genome sequencing data
M Wuzinski, AK Bak, A Petkau, WHB Demczuk, H Soualhine, MK Sharma
International Journal of Mycobacteriology 8 (3), 273, 2019
82019
Sequence database versioning for command line and Galaxy bioinformatics servers
DM Dooley, AJ Petkau, G Van Domselaar, WWL Hsiao
Bioinformatics 32 (8), 1275-1277, 2016
52016
Correlation between Phenotypic and In Silico Detection of Antimicrobial Resistance in Salmonella enterica in Canada Using Staramr
A Bharat, A Petkau, BP Avery, JC Chen, JP Folster, CA Carson, ...
Microorganisms 10 (2), 292, 2022
42022
Investigation of Two Mycobacterium abscessus Outbreaks in Quebec Using Whole Genome Sequencing
M Wuzinski, H Soualhine, E Valliere, PM Akochy, N Cloutier, A Petkau, ...
BioMed Research International 2020, 2020
12020
Outbreak surveillance and investigation using IRIDA and SNVPhyl
A Petkau, F Bristow, T Matthews, J Adam, P Mabon, C Sieffert, E Enns, ...
F1000Research 5, 2016
2016
Design and implementation of an ontology for public health genomic epidemiology
M Courtot, D Dooley, E Griffiths, J Adam, F Bristow, J a Carriço, BK Dhillon, ...
F1000Research 5, 2014
2014
1. Department of Microbiology and Immunology, McGill Genome Centre, McGill University, Montreal, Quebec, Canada 2. Research Centre, Montreal Heart Institute, Montreal, Quebec …
CL Murall, R Poujol, A Petkau, B Sobkowiak, A Zetner, SA Kraemer, ...
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Articles 1–19