Julio Cesar Ignacio Espinoza
Julio Cesar Ignacio Espinoza
Marine Environmental Biology, University of Southern California
Verified email at
Cited by
Cited by
Determinants of community structure in the global plankton interactome
G Lima-Mendez, K Faust, N Henry, J Decelle, S Colin, F Carcillo, ...
Science 348 (6237), 1262073, 2015
Patterns and ecological drivers of ocean viral communities
JR Brum, JC Ignacio-Espinoza, S Roux, G Doulcier, SG Acinas, A Alberti, ...
Science 348 (6237), 1261498, 2015
Plankton networks driving carbon export in the oligotrophic ocean
L Guidi, S Chaffron, L Bittner, D Eveillard, A Larhlimi, S Roux, Y Darzi, ...
Nature 532 (7600), 465-470, 2016
Genomic analysis of oceanic cyanobacterial myoviruses compared with T4‐like myoviruses from diverse hosts and environments
MB Sullivan, KH Huang, JC Ignacio‐Espinoza, AM Berlin, L Kelly, ...
Environmental microbiology 12 (11), 3035-3056, 2010
Viral tagging reveals discrete populations in Synechococcus viral genome sequence space
L Deng, JC Ignacio-Espinoza, AC Gregory, BT Poulos, JS Weitz, ...
Nature 513 (7517), 242-245, 2014
Sequencing platform and library preparation choices impact viral metagenomes
SA Solonenko, JC Ignacio-Espinoza, A Alberti, C Cruaud, S Hallam, ...
BMC genomics 14 (1), 1-12, 2013
Phylogenomics of T4 cyanophages: lateral gene transfer in the ‘core’and origins of host genes
JC Ignacio‐Espinoza, MB Sullivan
Environmental microbiology 14 (8), 2113-2126, 2012
Genomic differentiation among wild cyanophages despite widespread horizontal gene transfer
AC Gregory, SA Solonenko, JC Ignacio-Espinoza, K LaButti, A Copeland, ...
BMC genomics 17 (1), 1-13, 2016
Illuminating structural proteins in viral “dark matter” with metaproteomics
JR Brum, JC Ignacio-Espinoza, EH Kim, G Trubl, RM Jones, S Roux, ...
Proceedings of the National Academy of Sciences 113 (9), 2436-2441, 2016
The global virome: not as big as we thought?
JC Ignacio-Espinoza, SA Solonenko, MB Sullivan
Current opinion in virology 3 (5), 566-571, 2013
Dynamic marine viral infections and major contribution to photosynthetic processes shown by spatiotemporal picoplankton metatranscriptomes
ET Sieradzki, JC Ignacio-Espinoza, DM Needham, EB Fichot, JA Fuhrman
Nature communications 10 (1), 1-9, 2019
A network-based integrated framework for predicting virus–prokaryote interactions
W Wang, J Ren, K Tang, E Dart, JC Ignacio-Espinoza, JA Fuhrman, ...
NAR genomics and bioinformatics 2 (2), lqaa044, 2020
Long-term stability and Red Queen-like strain dynamics in marine viruses
JC Ignacio-Espinoza, NA Ahlgren, JA Fuhrman
Nature Microbiology 5 (2), 265-271, 2020
Tara Oceans Consortium Coordinators
L Guidi, S Chaffron, L Bittner, D Eveillard, A Larhlimi, S Roux, Y Darzi, ...
Stemmann L, Not F, Hingamp P, Speich S, Follows M, Karp-Boss L, Boss E …, 2016
Benchmarking microbial growth rate predictions from metagenomes
AM Long, S Hou, JC Ignacio-Espinoza, JA Fuhrman
The ISME journal 15 (1), 183-195, 2021
Tara Oceans Coordinators. 2015
JR Brum, JC Ignacio-Espinoza, S Roux, G Doulcier, SG Acinas, A Alberti, ...
Patterns and ecological drivers of ocean viral communities. Science 348 …, 0
Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca …
MA Martinez, BJ Woodcroft, JCI Espinoza, AA Zayed, CM Singleton, ...
Systematic and applied microbiology 42 (1), 54-66, 2019
Life-Style and Genome Structure of Marine Pseudoalteromonas Siphovirus B8b Isolated from the Northwestern Mediterranean Sea
E Lara, K Holmfeldt, N Solonenko, EL Są, JC Ignacio-Espinoza, ...
PLoS One 10 (1), e0114829, 2015
Ribosome-linked mRNA-rRNA chimeras reveal active novel virus host associations
JC Ignacio-Espinoza, SM Laperriere, YC Yeh, J Weissman, S Hou, ...
bioRxiv, 2020
Closing the gaps on the viral photosystem‐I psaDCAB gene organization
S Roitman, J Flores‐Uribe, A Philosof, B Knowles, F Rohwer, ...
Environmental microbiology 17 (12), 5100-5108, 2015
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