Tae-Hyuk Ahn
Tae-Hyuk Ahn
Associate Professor, Computer Science, Saint Louis University
Verified email at - Homepage
Cited by
Cited by
Insights from 20 years of bacterial genome sequencing
M Land, L Hauser, SR Jun, I Nookaew, MR Leuze, TH Ahn, T Karpinets, ...
Functional & integrative genomics 15, 141-161, 2015
Sigma: strain-level inference of genomes from metagenomic analysis for biosurveillance
TH Ahn, J Chai, C Pan
Bioinformatics 31 (2), 170-177, 2015
Omega: an Overlap-graph de novo Assembler for Metagenomics
B Haider, TH Ahn, B Bushnell, J Chai, A Copeland, C Pan
Bioinformatics 30 (19), 2717-2722, 2014
Diverse and divergent protein post-translational modifications in two growth stages of a natural microbial community
Z Li, Y Wang, Q Yao, NB Justice, TH Ahn, D Xu, RL Hettich, JF Banfield, ...
Nature communications 5 (1), 4405, 2014
Single-cell transcriptional analyses identify lineage-specific epithelial responses to inflammation and metaplastic development in the gastric corpus
KA Bockerstett, SA Lewis, CN Noto, EL Ford, JB Saenz, NM Jackson, ...
Gastroenterology 159 (6), 2116-2129. e4, 2020
Single-cell transcriptional analyses of spasmolytic polypeptide-expressing metaplasia arising from acute drug injury and chronic inflammation in the stomach
KA Bockerstett, SA Lewis, KJ Wolf, CN Noto, NM Jackson, EL Ford, ...
Gut 69 (6), 1027-1038, 2020
Massive metagenomic data analysis using abundance-based machine learning
ZN Harris, E Dhungel, M Mosior, TH Ahn
Biology direct 14, 1-13, 2019
Sipros/ProRata: a versatile informatics system for quantitative community proteomics
Y Wang, TH Ahn, Z Li, C Pan
Bioinformatics 29 (16), 2064-2065, 2013
YeasTSS: an integrative web database of yeast transcription start sites
J McMillan, Z Lu, JS Rodriguez, TH Ahn, Z Lin
Database 2019, baz048, 2019
Identifying and tracking low-frequency virus-specific TCR clonotypes using high-throughput sequencing
K Wolf, T Hether, P Gilchuk, A Kumar, A Rajeh, C Schiebout, J Maybruck, ...
Cell reports 25 (9), 2369-2378. e4, 2018
Functional phylogenomics analysis of bacteria and archaea using consistent genome annotation with UniFam
J Chai, G Kora, TH Ahn, D Hyatt, C Pan
BMC evolutionary biology 14, 1-13, 2014
Stochastic exit from mitosis in budding yeast: model predictions and experimental observations
DA Ball, TH Ahn, P Wang, KC Chen, Y Cao, JJ Tyson, J Peccoud, ...
Cell cycle 10 (6), 999-1009, 2011
LONGO: an R package for interactive gene length dependent analysis for neuronal identity
MJ McCoy, AJ Paul, MB Victor, M Richner, HW Gabel, H Gong, AS Yoo, ...
Bioinformatics 34 (13), i422-i428, 2018
Implicit simulation methods for stochastic chemical kinetics
TH Ahn, A Sandu, X Han
Journal of Applied Analysis and Computation 6 (3), 420-452, 2015
A framework to analyze the performance of load balancing schemes for ensembles of stochastic simulations
TH Ahn, A Sandu, LT Watson, CA Shaffer, Y Cao, WT Baumann
International Journal of Parallel Programming 43, 597-630, 2015
Evaluating Performance Optimizations of Large-scale Genomic Sequence Search Applications using SST/macro.
TH Ahn, D Dechev, H Lin, H Adalsteinsson, CL Janssen
SIMULTECH, 65-73, 2011
DNA based methods in intelligence-moving towards metagenomics
G Mason-Buck, A Graf, E Elhaik, J Robinson, E Pospiech, M Oliveira, ...
Preprints, 2020
Stochastic Simulation Algorithms for Chemical Reactions.
TH Ahn, Y Cao, LT Watson
BIOCOMP, 431-436, 2008
MegaR: an interactive R package for rapid sample classification and phenotype prediction using metagenome profiles and machine learning
E Dhungel, Y Mreyoud, HJ Gwak, A Rajeh, M Rho, TH Ahn
BMC bioinformatics 22, 1-12, 2021
TSSr: an R package for comprehensive analyses of TSS sequencing data
Z Lu, K Berry, Z Hu, Y Zhan, TH Ahn, Z Lin
NAR Genomics and Bioinformatics 3 (4), lqab108, 2021
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