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Zhuoran Xu
Zhuoran Xu
Verified email at pennmedicine.upenn.edu
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Machine learning of clinical variables and coronary artery calcium scoring for the prediction of obstructive coronary artery disease on coronary computed tomography angiography …
SJ Al’Aref, G Maliakal, G Singh, AR van Rosendael, X Ma, Z Xu, ...
European heart journal 41 (3), 359-367, 2020
1762020
Determinants of in‐hospital mortality after percutaneous coronary intervention: a machine learning approach
SJ Al'Aref, G Singh, AR van Rosendael, KK Kolli, X Ma, G Maliakal, ...
Journal of the American Heart Association 8 (5), e011160, 2019
712019
Identification and quantification of cardiovascular structures from CCTA: an end-to-end, rapid, pixel-wise, deep-learning method
L Baskaran, G Maliakal, SJ Al’Aref, G Singh, Z Xu, K Michalak, K Dolan, ...
Cardiovascular Imaging 13 (5), 1163-1171, 2020
652020
Uncovering the Functional Link Between SHANK3 Deletions and Deficiency in Neurodevelopment Using iPSC-Derived Human Neurons
G Huang, S Chen, X Chen, J Zheng, Z Xu, A Doostparast Torshizi, S Gong, ...
Frontiers in neuroanatomy 13, 23, 2019
472019
A boosted ensemble algorithm for determination of plaque stability in high-risk patients on coronary CTA
SJ Al’Aref, G Singh, JW Choi, Z Xu, G Maliakal, AR van Rosendael, ...
Cardiovascular Imaging 13 (10), 2162-2173, 2020
402020
Comparing a novel machine learning method to the Friedewald formula and Martin-Hopkins equation for low-density lipoprotein estimation
G Singh, Y Hussain, Z Xu, E Sholle, K Michalak, K Dolan, BC Lee, ...
PLoS One 15 (9), e0239934, 2020
372020
Automatic segmentation of multiple cardiovascular structures from cardiac computed tomography angiography images using deep learning
L Baskaran, SJ Al’Aref, G Maliakal, BC Lee, Z Xu, JW Choi, SE Lee, ...
PloS one 15 (5), e0232573, 2020
332020
Deep learning predicts chromosomal instability from histopathology images
Z Xu, A Verma, U Naveed, SF Bakhoum, P Khosravi, O Elemento
IScience 24 (5), 2021
272021
Machine learning insight into the role of imaging and clinical variables for the prediction of obstructive coronary artery disease and revascularization: An exploratory …
L Baskaran, X Ying, Z Xu, SJ Al’Aref, BC Lee, SE Lee, I Danad, HB Park, ...
PLoS One 15 (6), e0233791, 2020
192020
Extraction of radiographic findings from unstructured thoracoabdominal computed tomography reports using convolutional neural network based natural language processing
M Pandey, Z Xu, E Sholle, G Maliakal, G Singh, Z Fatima, D Larine, ...
PLoS One 15 (7), e0236827, 2020
182020
Utilizing electronic health data and machine learning for the prediction of 30-day unplanned readmission or all-cause mortality in heart failure
AN Beecy, M Gummalla, E Sholle, Z Xu, Y Zhang, K Michalak, K Dolan, ...
Cardiovascular Digital Health Journal 1 (2), 71-79, 2020
132020
Machine learning can aid in prediction of IDH mutation from H&E-stained histology slides in infiltrating gliomas
B Liechty, Z Xu, Z Zhang, C Slocum, CD Bahadir, MR Sabuncu, ...
Scientific Reports 12 (1), 22623, 2022
112022
Using histopathology images to predict chromosomal instability in breast cancer: a deep learning approach
Z Xu, A Verma, U Naveed, S Bakhoum, P Khosravi, O Elemento
medRxiv, 2020.09. 23.20200139, 2020
52020
Determinants of in-hospital mortality after percutaneous coronary intervention: a machine learning approach. J Am Heart Assoc. 2019; 8 (5): e011160
SJ Al'Aref, G Singh, AR van Rosendael, KK Kolli, X Ma, G Maliakal, ...
5
Automatic segmentation of cardiovascular structures imaged on cardiac computed tomography angiography using deep learning
L Baskaran, G Singh, Z Xu, B Lee, J Choi, U Gianni, A van Rosendael, ...
Journal of the American College of Cardiology 75 (11_Supplement_1), 3497-3497, 2020
32020
PhenoSV: interpretable phenotype-aware model for the prioritization of genes affected by structural variants
Z Xu, Q Li, L Marchionni, K Wang
Nature Communications 14 (1), 7805, 2023
12023
Multi-omics biomarkers aid prostate cancer prognostication
Z Xu, M Omar, E Benedetti, J Rosenthal, R Umeton, J Krumsiek, ...
bioRxiv, 2022.09. 20.508244, 2022
12022
Semi-Supervised, Attention-Based Deep Learning for Predicting TMPRSS2: ERG Fusion Status in Prostate Cancer Using Whole Slide Images
M Omar, Z Xu, SB Rand, MK Alexanderani, DC Salles, I Valencia, ...
Molecular Cancer Research, OF1-OF13, 2024
2024
Single-Cell Omics for Transcriptome CHaracterization (SCOTCH): isoform-level characterization of gene expression through long-read single-cell RNA sequencing
Z Xu, HQ Qu, C Kao, H Hakonarson, K Wang
bioRxiv, 2024.04. 29.590597, 2024
2024
MultiNEP: a multi-omics network enhancement framework for prioritizing disease genes and metabolites simultaneously
Z Xu, L Marchionni, S Wang
Bioinformatics 39 (6), btad333, 2023
2023
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