Uthsav Chitra

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Ben RaphaelProfessor of Computer Science, Princeton UniversityVerified email at princeton.edu
Christopher MuscoAssistant Professor, New York UniversityVerified email at nyu.edu
Cong MaPostdoctoral Research Associate, Princeton UniversityVerified email at princeton.edu
Tyler ParkPostdoctoral scholar, Memorial Sloan Kettering Cancer CenterVerified email at mskcc.org
Rebecca ElyanowAdaptive BiotechnologiesVerified email at adaptivebiotech.com
Matthew A ReynaEmory UniversityVerified email at emory.edu
Hirak SarkarLudwig Scholar at Princeton UniversityVerified email at hms.harvard.edu
Brian J ArnoldPrinceton UniversityVerified email at princeton.edu
Tarun ChitraGauntletVerified email at gauntlet.network
Jasper C.H. LeeAssistant Professor, Department of Computer Science, UC DavisVerified email at ucdavis.edu
Sereno Lopez-DarwinLewis-Sigler Institute, Princeton UniversityVerified email at princeton.edu

Uthsav Chitra

EWSC Postdoctoral Fellow, Broad Institute

Verified email at broadinstitute.org - Homepage

Computational Biology Networks Spatial Transcriptomics


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Analyzing the impact of filter bubbles on social network polarization U Chitra, C Musco Proceedings of the 13th International Conference on Web Search and Data …, 2020	164*	2020
Random walks on hypergraphs with edge-dependent vertex weights U Chitra, B Raphael International conference on machine learning, 1172-1181, 2019	113	2019
NetMix: A Network-Structured Mixture Model for Reduced-Bias Estimation of Altered Subnetworks. MA Reyna, U Chitra, R Elyanow, BJ Raphael RECOMB, 169-185, 2020	12	2020
Belayer: Modeling discrete and continuous spatial variation in gene expression from spatially resolved transcriptomics C Ma, U Chitra, S Zhang, BJ Raphael Cell Systems 13 (10), 786-797. e13, 2022	10	2022
NetMix2: Unifying network propagation and altered subnetworks U Chitra, TY Park, BJ Raphael International Conference on Research in Computational Molecular Biology, 193-208, 2022	5*	2022
Committee selection is more similar than you think: Evidence from avalanche and stellar T Chitra, U Chitra arXiv preprint arXiv:1904.09839, 2019	5	2019
Quantifying and reducing bias in maximum likelihood estimation of structured anomalies U Chitra, K Ding, JCH Lee, BJ Raphael International Conference on Machine Learning, 1908-1919, 2021	4	2021
Mapping the topography of spatial gene expression with interpretable deep learning U Chitra, BJ Arnold, H Sarkar, C Ma, S Lopez-Darwin, K Sanno, ... International Conference on Research in Computational Molecular Biology, 368-371, 2024	3	2024
A count-based model for delineating cell–cell interactions in spatial transcriptomics data H Sarkar, U Chitra, J Gold, BJ Raphael Bioinformatics 40 (Supplement_1), i481-i489, 2024		2024
Quantifying higher-order epistasis: beware the chimera U Chitra, BJ Arnold, B Raphael bioRxiv, 2024.07. 17.603976, 2024		2024
A latent variable model for evaluating mutual exclusivity and co-occurrence between driver mutations in cancer A Shuaibi, U Chitra, B Raphael bioRxiv, 2024.04. 24.590995, 2024		2024

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