Christine Orengo
Christine Orengo
Professor of Bioinformatics, University College London
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عدد مرات الاقتباسات
عدد مرات الاقتباسات
CATH–a hierarchic classification of protein domain structures
CA Orengo, AD Michie, S Jones, DT Jones, MB Swindells, JM Thornton
Structure 5 (8), 1093-1109, 1997
InterPro: the integrative protein signature database
S Hunter, R Apweiler, TK Attwood, A Bairoch, A Bateman, D Binns, P Bork, ...
Nucleic acids research 37 (suppl_1), D211-D215, 2009
InterPro in 2011: new developments in the family and domain prediction database
S Hunter, P Jones, A Mitchell, R Apweiler, TK Attwood, A Bateman, ...
Nucleic acids research 40 (D1), D306-D312, 2012
The InterPro protein families database: the classification resource after 15 years
A Mitchell, HY Chang, L Daugherty, M Fraser, S Hunter, R Lopez, ...
Nucleic acids research 43 (D1), D213-D221, 2015
Protein superfamilles and domain superfolds
CA Orengo, DT Jones, JM Thornton
Nature 372 (6507), 631-634, 1994
InterPro in 2017—beyond protein family and domain annotations
RD Finn, TK Attwood, PC Babbitt, A Bateman, P Bork, AJ Bridge, ...
Nucleic acids research 45 (D1), D190-D199, 2017
Protein structure alignment
WR Taylor, CA Orengo
Journal of molecular biology 208 (1), 1-22, 1989
Evolution of function in protein superfamilies, from a structural perspective
AE Todd, CA Orengo, JM Thornton
Journal of molecular biology 307 (4), 1113-1143, 2001
A large-scale evaluation of computational protein function prediction
P Radivojac, WT Clark, TR Oron, AM Schnoes, T Wittkop, A Sokolov, ...
Nature methods 10 (3), 221-227, 2013
One fold with many functions: the evolutionary relationships between TIM barrel families based on their sequences, structures and functions
N Nagano, CA Orengo, JM Thornton
Journal of molecular biology 321 (5), 741-765, 2002
New developments in the InterPro database
NJ Mulder, R Apweiler, TK Attwood, A Bairoch, A Bateman, D Binns, ...
Nucleic acids research 35 (suppl_1), D224-D228, 2007
Predicting protein function from sequence and structure
D Lee, O Redfern, C Orengo
Nature Reviews Molecular Cell Biology 8 (12), 995-1005, 2007
Transient protein-protein interactions: structural, functional, and network properties
JR Perkins, I Diboun, BH Dessailly, JG Lees, C Orengo
Structure 18 (10), 1233-1243, 2010
CATH: comprehensive structural and functional annotations for genome sequences
I Sillitoe, TE Lewis, A Cuff, S Das, P Ashford, NL Dawson, N Furnham, ...
Nucleic acids research 43 (D1), D376-D381, 2015
[36] SSAP: sequential structure alignment program for protein structure comparison
CA Orengo, WR Taylor
Methods in enzymology 266, 617-635, 1996
InterPro in 2019: improving coverage, classification and access to protein sequence annotations
AL Mitchell, TK Attwood, PC Babbitt, M Blum, P Bork, A Bridge, SD Brown, ...
Nucleic acids research 47 (D1), D351-D360, 2019
Protein families and their evolution—a structural perspective
CA Orengo, JM Thornton
Annu. Rev. Biochem. 74, 867-900, 2005
The CATH Domain Structure Database and related resources Gene3D and DHS provide comprehensive domain family information for genome analysis
F Pearl, A Todd, I Sillitoe, M Dibley, O Redfern, T Lewis, C Bennett, ...
Nucleic acids research 33 (suppl_1), D247-D251, 2005
The CATH domain structure database: new protocols and classification levels give a more comprehensive resource for exploring evolution
LH Greene, TE Lewis, S Addou, A Cuff, T Dallman, M Dibley, O Redfern, ...
Nucleic acids research 35 (suppl_1), D291-D297, 2007
Microarray analysis after RNA amplification can detect pronounced differences in gene expression using limma
I Diboun, L Wernisch, CA Orengo, M Koltzenburg
BMC genomics 7 (1), 252, 2006
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مقالات 1–20