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Gavin Bascom
Gavin Bascom
Redesign Science
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Title
Cited by
Cited by
Year
Cohesin loss eliminates all loop domains
SSP Rao, SC Huang, BG St Hilaire, JM Engreitz, EM Perez, ...
Cell 171 (2), 305-320. e24, 2017
16142017
Hierarchical looping of zigzag nucleosome chains in metaphase chromosomes
SA Grigoryev, G Bascom, JM Buckwalter, MB Schubert, CL Woodcock, ...
Proceedings of the National Academy of Sciences 113 (5), 1238-1243, 2016
1362016
Scaling molecular dynamics beyond 100,000 processor cores for large‐scale biophysical simulations
J Jung, W Nishima, M Daniels, G Bascom, C Kobayashi, A Adedoyin, ...
Journal of computational chemistry 40 (21), 1919-1930, 2019
1192019
A general method for constructing atomic-resolution RNA ensembles using NMR residual dipolar couplings: the basis for interhelical motions revealed
L Salmon, G Bascom, I Andricioaei, HM Al-Hashimi
Journal of the American Chemical Society 135 (14), 5457-5466, 2013
1162013
Probing Sequence-Specific DNA Flexibility in A-Tracts and Pyrimidine-Purine Steps by Nuclear Magnetic Resonance 13C Relaxation and Molecular Dynamics …
EN Nikolova, GD Bascom, I Andricioaei, HM Al-Hashimi
Biochemistry 51 (43), 8654-8664, 2012
552012
Mesoscale modeling reveals formation of an epigenetically driven HOXC gene hub
GD Bascom, CG Myers, T Schlick
Proceedings of the National Academy of Sciences 116 (11), 4955-4962, 2019
542019
Linking chromatin fibers to gene folding by hierarchical looping
G Bascom, T Schlick
Biophysical journal 112 (3), 434-445, 2017
532017
Mesoscale modeling reveals hierarchical looping of chromatin fibers near gene regulatory elements
GD Bascom, KY Sanbonmatsu, T Schlick
The Journal of Physical Chemistry B 120 (33), 8642-8653, 2016
382016
Kilobase pair chromatin fiber contacts promoted by living-system-like DNA linker length distributions and nucleosome depletion
GD Bascom, T Kim, T Schlick
The Journal of Physical Chemistry B 121 (15), 3882-3894, 2017
312017
Chromatin fiber folding directed by cooperative histone tail acetylation and linker histone binding
GD Bascom, T Schlick
Biophysical journal 114 (10), 2376-2385, 2018
292018
Mesoscale modeling of chromatin fibers
GD Bascom, T Schlick
Nuclear architecture and dynamics, 123-147, 2018
202018
Design, synthesis, and activity of a series of arylpyrid-3-ylmethanones as type I positive allosteric modulators of α7 nicotinic acetylcholine receptors
DJ Hogenkamp, TA Ford-Hutchinson, WY Li, ER Whittemore, ...
Journal of medicinal chemistry 56 (21), 8352-8365, 2013
142013
Single-walled carbon nanotubes modulate the B-to A-DNA transition
G Bascom, I Andricioaei
The Journal of Physical Chemistry C 118 (50), 29441-29447, 2014
52014
On the Inside of a Marble
G Bascom
On the Inside of a Marble, 2017
12017
Simulating Nucleic Acids from Nanoseconds to Microseconds
GD Bascom
University of California, Irvine, 2014
12014
A Statistical Mechanical View of the Universe
G Bascom
On the Inside of a Marble, 81-92, 2017
2017
Narrative Time
G Bascom
On the Inside of a Marble, 21-37, 2017
2017
Putting the Future at the Beginning
G Bascom
On the Inside of a Marble, 93-104, 2017
2017
Narrative Space
G Bascom
On the Inside of a Marble, 39-53, 2017
2017
A Universe Far from Equilibrium
G Bascom
On the Inside of a Marble, 65-79, 2017
2017
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