| The transcriptional landscape of the mammalian genome P Carninci, T Kasukawa, S Katayama, J Gough, MC Frith, N Maeda, ... science 309 (5740), 1559-1563, 2005 | 3499 | 2005 |
| Visualising associations between paired ‘omics’ data sets I González, KA Lę Cao, MJ Davis, S Déjean BioData mining 5 (1), 1-23, 2012 | 173 | 2012 |
| Supervised, semi-supervised and unsupervised inference of gene regulatory networks SR Maetschke, PB Madhamshettiwar, MJ Davis, MA Ragan Briefings in bioinformatics 15 (2), 195-211, 2014 | 139 | 2014 |
| Identifying the molecular phenotype of renal progenitor cells GA Challen, G Martinez, MJ Davis, DF Taylor, M Crowe, RD Teasdale, ... Journal of the American Society of Nephrology 15 (9), 2344-2357, 2004 | 139 | 2004 |
| Gene regulatory network inference: evaluation and application to ovarian cancer allows the prioritization of drug targets PB Madhamshettiwar, SR Maetschke, MJ Davis, A Reverter, MA Ragan Genome medicine 4 (5), 1-16, 2012 | 138 | 2012 |
| Structure-based reassessment of the caveolin signaling model: do caveolae regulate signaling through caveolin-protein interactions? BM Collins, MJ Davis, JF Hancock, RG Parton Developmental cell 23 (1), 11-20, 2012 | 117 | 2012 |
| FANTOM Consortium; RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group). The transcriptional landscape of the mammalian genome P Carninci Science 309, 1559-1563, 2005 | 108* | 2005 |
| Mouse proteome analysis A Kanapin, S Batalov, MJ Davis, J Gough, S Grimmond, H Kawaji, ... Genome research 13 (6b), 1335-1344, 2003 | 101 | 2003 |
| LOCATE: a mouse protein subcellular localization database JL Fink, RN Aturaliya, MJ Davis, F Zhang, K Hanson, MS Teasdale, C Kai, ... Nucleic Acids Research 34 (suppl_1), D213-D217, 2006 | 98 | 2006 |
| Construction of developmental lineage relationships in the mouse mammary gland by single-cell RNA profiling B Pal, Y Chen, F Vaillant, P Jamieson, L Gordon, AC Rios, S Wilcox, N Fu, ... Nature communications 8 (1), 1-14, 2017 | 94 | 2017 |
| Research resource: nuclear receptors as transcriptome: discriminant and prognostic value in breast cancer GEO Muscat, NA Eriksson, K Byth, S Loi, D Graham, S Jindal, MJ Davis, ... Molecular endocrinology 27 (2), 350-365, 2013 | 82 | 2013 |
| The mouse secretome: functional classification of the proteins secreted into the extracellular environment SM Grimmond, KC Miranda, Z Yuan, MJ Davis, DA Hume, K Yagi, ... Genome research 13 (6b), 1350-1359, 2003 | 82 | 2003 |
| Annotated genes and nonannotated genomes: cross‐species use of Gene Ontology in ecology and evolution research CR Primmer, S Papakostas, EH Leder, MJ Davis, MA Ragan Molecular ecology 22 (12), 3216-3241, 2013 | 78 | 2013 |
| Protein-protein interaction as a predictor of subcellular location CJ Shin, S Wong, MJ Davis, MA Ragan BMC systems biology 3 (1), 1-20, 2009 | 69 | 2009 |
| Expression of PTRF in PC-3 Cells modulates cholesterol dynamics and the actin cytoskeleton impacting secretion pathways KL Inder, YZ Zheng, MJ Davis, H Moon, D Loo, H Nguyen, JA Clements, ... Molecular & Cellular Proteomics 11 (2), M111. 012245, 2012 | 66 | 2012 |
| Gene Ontology-driven inference of protein–protein interactions using inducers SR Maetschke, M Simonsen, MJ Davis, MA Ragan Bioinformatics 28 (1), 69-75, 2012 | 63 | 2012 |
| Sleeping Beauty mutagenesis in a mouse medulloblastoma model defines networks that discriminate between human molecular subgroups LA Genovesi, CG Ng, MJ Davis, M Remke, MD Taylor, DJ Adams, ... Proceedings of the National Academy of Sciences 110 (46), E4325-E4334, 2013 | 61 | 2013 |
| A gene signature predicting natural killer cell infiltration and improved survival in melanoma patients J Cursons, F Souza-Fonseca-Guimaraes, M Foroutan, A Anderson, ... Cancer immunology research 7 (7), 1162-1174, 2019 | 60 | 2019 |
| Single sample scoring of molecular phenotypes M Foroutan, DD Bhuva, R Lyu, K Horan, J Cursons, MJ Davis BMC bioinformatics 19 (1), 1-10, 2018 | 52 | 2018 |
| Predicting the solvent accessibility of transmembrane residues from protein sequence Z Yuan, F Zhang, MJ Davis, M Bodén, RD Teasdale Journal of proteome research 5 (5), 1063-1070, 2006 | 51 | 2006 |
Mark A. RaganInstitute for Molecular Bioscience, The University of QueenslandVerified email at uq.edu.au
