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Ehsan Habibi
Ehsan Habibi
Broad Institute of MIT and Harvard
Verified email at broadinstitute.org
Title
Cited by
Cited by
Year
Glutaminolysis and fumarate accumulation integrate immunometabolic and epigenetic programs in trained immunity
RJW Arts, B Novakovic, R Ter Horst, A Carvalho, S Bekkering, ...
Cell metabolism 24 (6), 807-819, 2016
6882016
Genetic drivers of epigenetic and transcriptional variation in human immune cells
L Chen, B Ge, FP Casale, L Vasquez, T Kwan, D Garrido-Martín, S Watt, ...
Cell 167 (5), 1398-1414. e24, 2016
6472016
β-Glucan reverses the epigenetic state of LPS-induced immunological tolerance
B Novakovic*, E Habibi*, SY Wang*, RJW Arts, R Davar, ...
Cell 167 (5), 1354-1368. e14, 2016
5442016
Whole-genome bisulfite sequencing of two distinct interconvertible DNA methylomes of mouse embryonic stem cells
E Habibi, AB Brinkman, J Arand, LI Kroeze, HHD Kerstens, F Matarese, ...
Cell stem cell 13 (3), 360-369, 2013
4932013
Impairment of DNA methylation maintenance is the main cause of global demethylation in naive embryonic stem cells
F von Meyenn*, M Iurlaro*, E Habibi*, NQ Liu, A Salehzadeh-Yazdi, ...
Molecular cell 62 (6), 848-861, 2016
2512016
Molecular logic of cellular diversification in the mouse cerebral cortex
DJ Di Bella*, E Habibi*, RR Stickels, G Scalia, J Brown, P Yadollahpour, ...
Nature, 1-6, 2021
2242021
Dynamic reorganization of extremely long-range promoter-promoter interactions between two states of pluripotency
O Joshi, SY Wang, T Kuznetsova, Y Atlasi, T Peng, PJ Fabre, E Habibi, ...
Cell stem cell 17 (6), 748-757, 2015
1992015
Dynamics of transcription regulation in human bone marrow myeloid differentiation to mature blood neutrophils
L Grassi, F Pourfarzad, S Ullrich, A Merkel, F Were, ...
Cell reports 24 (10), 2784-2794, 2018
1122018
Joint single-cell measurements of nuclear proteins and RNA in vivo
H Chung, CN Parkhurst, EM Magee, D Phillips, E Habibi, F Chen, ...
Nature methods 18 (10), 1204-1212, 2021
822021
Emerging roles of epigenetic mechanisms in Parkinson’s disease
E Habibi, A Masoudi-Nejad, HM Abdolmaleky, SJ Haggarty
Functional & integrative genomics 11, 523-537, 2011
652011
Epigenetic modulation of a hardwired 3D chromatin landscape in two naive states of pluripotency
Y Atlasi, W Megchelenbrink, T Peng, E Habibi, O Joshi, SY Wang, ...
Nature cell biology 21 (5), 568-578, 2019
572019
Vitamin C and l-proline antagonistic effects capture alternative states in the pluripotency continuum
C D'Aniello, E Habibi, F Cermola, D Paris, F Russo, A Fiorenzano, ...
Stem Cell Reports 8 (1), 1-10, 2017
512017
Increased H3K9 methylation and impaired expression of Protocadherins are associated with the cognitive dysfunctions of the Kleefstra syndrome
G Iacono, A Dubos, H Méziane, M Benevento, E Habibi, A Mandoli, F Riet, ...
Nucleic Acids Research 46 (10), 4950-4965, 2018
412018
Chromatin-based classification of genetically heterogeneous AMLs into two distinct subtypes with diverse stemness phenotypes
G Yi, ATJ Wierenga, F Petraglia, P Narang, EM Janssen-Megens, ...
Cell reports 26 (4), 1059-1069. e6, 2019
372019
Compressed sensing for highly efficient imaging transcriptomics
B Cleary, B Simonton, J Bezney, E Murray, S Alam, A Sinha, E Habibi, ...
Nature biotechnology 39 (8), 936-942, 2021
362021
Simultaneous single cell measurements of intranuclear proteins and gene expression
H Chung, CN Parkhurst, EM Magee, D Phillips, E Habibi, F Chen, ...
BioRxiv, 2021.01. 18.427139, 2021
212021
Urate-induced epigenetic modifications in myeloid cells
M Badii, OI Gaal, MC Cleophas, V Klück, R Davar, E Habibi, ST Keating, ...
Arthritis Research & Therapy 23, 1-11, 2021
182021
Molecular logic of cellular diversification in the mammalian cerebral cortex
DJ Di Bella*, E Habibi*, SM Yang, RR Stickels, J Brown, P Yadollahpour, ...
bioRxiv, 2020
152020
Multi-omics profiling reveals a distinctive epigenome signature for high-risk acute promyelocytic leukemia
AA Singh, F Petraglia, A Nebbioso, G Yi, M Conte, S Valente, A Mandoli, ...
Oncotarget 9 (39), 25647, 2018
152018
Transcriptional and epigenetic control in mouse pluripotency: lessons from in vivo and in vitro studies
E Habibi, HG Stunnenberg
Current Opinion in Genetics & Development 46, 114-122, 2017
142017
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Articles 1–20