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Alisandra K. Denton
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De Novo Assembly of a New Solanum pennellii Accession Using Nanopore Sequencing
MHW Schmidt, A Vogel, AK Denton, B Istace, A Wormit, H van de Geest, ...
The Plant Cell 29 (10), 2336-2348, 2017
1912017
Systems Analysis of a Maize Leaf Developmental Gradient Redefines the Current C4 Model and Provides Candidates for Regulation
TR Pick, A Bräutigam, U Schlüter, AK Denton, C Colmsee, U Scholz, ...
The Plant Cell 23 (12), 4208-4220, 2011
1772011
Predicting C4 photosynthesis evolution: modular, individually adaptive steps on a Mount Fuji fitness landscape
D Heckmann, S Schulze, A Denton, U Gowik, P Westhoff, APM Weber, ...
Cell 153 (7), 1579-1588, 2013
1702013
Footprints of parasitism in the genome of the parasitic flowering plant Cuscuta campestris
A Vogel, R Schwacke, AK Denton, B Usadel, J Hollmann, K Fischer, ...
Nature communications 9 (1), 2515, 2018
1252018
Comparative Transcriptome Atlases Reveal Altered Gene Expression Modules between Two Cleomaceae C3 and C4 Plant Species
C Külahoglu, AK Denton, M Sommer, J Maß, S Schliesky, TJ Wrobel, ...
The Plant Cell 26 (8), 3243-3260, 2014
982014
Early metabolic and transcriptional variations in fruit of natural white-fruited Fragaria vesca genotypes
K Härtl, A Denton, K Franz-Oberdorf, T Hoffmann, M Spornraft, B Usadel, ...
Scientific reports 7 (1), 45113, 2017
482017
Phosphate starvation causes different stress responses in the lipid metabolism of tomato leaves and roots
J Pfaff, AK Denton, B Usadel, C Pfaff
Biochimica et Biophysica Acta (BBA)-Molecular and Cell Biology of Lipids …, 2020
252020
Freeze-quenched maize mesophyll and bundle sheath separation uncovers bias in previous tissue-specific RNA-Seq data
AK Denton, J Maß, C Külahoglu, MJ Lercher, A Bräutigam, APM Weber
Journal of Experimental Botany 68 (2), 147-160, 2017
232017
Modeling protein destiny in developing fruit
I Belouah, C Nazaret, P Pétriacq, S Prigent, C Bénard, V Mengin, ...
Plant Physiology 180 (3), 1709-1724, 2019
202019
Understanding metabolite transport and metabolism in C4 plants through RNA-seq
U Schlüter, AK Denton, A Bräutigam
Current opinion in plant biology 31, 83-90, 2016
192016
C4 photosynthesis: from evolutionary analyses to strategies for synthetic reconstruction of the trait
AK Denton, R Simon, APM Weber
Current Opinion in Plant Biology 16 (3), 315-321, 2013
192013
Retained duplicate genes in green alga Chlamydomonas reinhardtii tend to be stress responsive and experience frequent response gains
G Wu, DE Hufnagel, AK Denton, SH Shiu
BMC genomics 16 (1), 1-12, 2015
132015
Transcriptomic and proteomic data in developing tomato fruit
I Belouah, C Bénard, A Denton, M Blein-Nicolas, T Balliau, E Teyssier, ...
Data in brief 28, 105015, 2020
92020
Footprints of parasitism in the genome of the parasitic flowering plant Cuscuta campestris. Nat Commun 9: 2515
A Vogel, R Schwacke, AK Denton, B Usadel, J Hollmann, K Fischer, ...
92018
A Solanum lycopersicoides reference genome facilitates biological discovery in tomato
AF Powell, LE Courtney, MHW Schmidt, A Feder, A Vogel, Y Xu, DA Lyon, ...
BiorXiv, 2020.04. 16.039636, 2020
82020
A Solanum lycopersicoides reference genome facilitates insights into tomato specialized metabolism and immunity
AF Powell, A Feder, J Li, MHW Schmidt, L Courtney, S Alseekh, ...
The Plant Journal 110 (6), 1791-1810, 2022
62022
Whole genome sequencing and assembly data of Moricandia moricandioides and M. arvensis
MY Lin, N Koppers, A Denton, U Schlüter, APM Weber
Data in Brief 35, 106922, 2021
52021
Helixer: cross-species gene annotation of large eukaryotic genomes using deep learning
F Stiehler, M Steinborn, S Scholz, D Dey, APM Weber, AK Denton
Bioinformatics 36 (22-23), 5291-5298, 2020
42020
LOGAN: A framework for LOssless Graph-based ANalysis of high throughput sequence data
A Bolger, A Denton, M Bolger, B Usadel
BioRxiv, 175976, 2017
22017
Transposable elements contribute to the establishment of the glycine shuttle in Brassicaceae species
S Triesch, AK Denton, JP Buchmann, V Reichel-Deland, ...
bioRxiv, 2022.12. 06.519256, 2022
2022
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Articles 1–20