| Cross-talk between colon cells and macrophages increases ST6GALNAC1 and MUC1-sTn expression in ulcerative colitis and colitis-associated colon cancer M Kvorjak, Y Ahmed, ML Miller, R Sriram, C Coronnello, JG Hashash, ... Cancer immunology research 8 (2), 167-178, 2020 | 72 | 2020 |
| Detecting liver fibrosis using a machine learning‐based approach to the quantification of the heart‐induced deformation in tagged MR images Y Ahmed, RS Hussein, TA Basha, AM Khalifa, AS Ibrahim, ... NMR in Biomedicine 33 (1), e4215, 2020 | 17 | 2020 |
| CLARINET: efficient learning of dynamic network models from literature Y Ahmed, CA Telmer, N Miskov-Zivanov Bioinformatics Advances 1 (1), vbab006, 2021 | 12 | 2021 |
| Dynamic system explanation: DySE, a framework that evolves to reason about complex systems-lessons learned CA Telmer, K Sayed, A Butchy, KN Bocan, E Holtzapple, CE Hansen, ... Proceedings of the Conference on Artificial Intelligence for Data Discovery …, 2019 | 5 | 2019 |
| ACCORDION: clustering and selecting relevant data for guided network extension and query answering Y Ahmed, C Telmer, N Miskov-Zivanov arXiv preprint arXiv:2002.05748, 2020 | 4 | 2020 |
| Guided assembly of cellular network models from knowledge in literature Y Ahmed, N Miskov-Zivanov 2021 43rd Annual International Conference of the IEEE Engineering in …, 2021 | 3 | 2021 |
| New advances in the automation of context-aware information selection and guided model assembly Y Ahmed, AA Butchy, K Sayed, C Telmer, N Miskov-Zivanov arXiv preprint arXiv:2110.10841, 2021 | 3 | 2021 |
| Classifying Literature Extracted Events for Automated Model Extension C Hansen, J Kisslinger, N Krishna, E Holtzapple, Y Ahmed, ... bioRxiv, 2021.09. 30.462421, 2021 | 3 | 2021 |
| Context-aware information selection and model recommendation with ACCORDION Y Ahmed, C Telmer, N Miskov-Zivanov bioRxiv, 2022.01. 22.477231, 2022 | 1 | 2022 |
| Context-aware knowledge selection and reliable model recommendation with ACCORDION Y Ahmed, CA Telmer, G Zhou, N Miskov-Zivanov Frontiers in Systems Biology 4, 1308292, 2024 | | 2024 |
| Towards the Automation of Expanding Dynamic Network Models with Knowledge from Literature Y Ahmed University of Pittsburgh, 2022 | | 2022 |
| The cross-talk between infiltrating macrophages and inflamed or malignant colonic epithelium promotes overexpression of ST6GALNAC1 and epithelial MUC1 tumor form MUC1-sTn S Cascio, M Kvorjak, Y Ahmed, M Miller, J Al Hashash, D Hartman, ... The Journal of Immunology 202 (1_Supplement), 135.5-135.5, 2019 | | 2019 |
| Detection of liver fibrosis from MRIusing histogram of strains YA Safwat, RS Hussein, A Khalifa, AS Ibrahim, A Samir, H Abdallah, ... Proc. Intl. Soc. Mag. Reson. Med 26, 2522, 2018 | | 2018 |
Natasa Miskov-ZivanovUniversity of Pittsburgh, ECE, BioE, CompBioVerified email at pitt.edu
