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William R. Cannon
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Integrating machine learning and multiscale modeling—perspectives, challenges, and opportunities in the biological, biomedical, and behavioral sciences
M Alber, A Buganza Tepole, WR Cannon, S De, S Dura-Bernal, ...
NPJ digital medicine 2 (1), 115, 2019
4022019
Multiscale modeling meets machine learning: What can we learn?
GCY Peng, M Alber, A Buganza Tepole, WR Cannon, S De, ...
Archives of Computational Methods in Engineering 28, 1017-1037, 2021
2332021
Sulfate anion in water: model structural, thermodynamic, and dynamic properties
WR Cannon, BM Pettitt, JA McCammon
The Journal of Physical Chemistry 98 (24), 6225-6230, 1994
2251994
A perspective on biological catalysis
WR Cannon, SF Singleton, SJ Benkovic
Nature structural biology 3 (10), 821-833, 1996
1901996
Solvation, reorganization energy, and biological catalysis
WR Cannon, SJ Benkovic
Journal of Biological Chemistry 273 (41), 26257-26260, 1998
1861998
Mathematical modeling of microbial community dynamics: a methodological review
HS Song, WR Cannon, AS Beliaev, A Konopka
Processes 2 (4), 711-752, 2014
1782014
Circadian proteomic analysis uncovers mechanisms of post-transcriptional regulation in metabolic pathways
JM Hurley, MS Jankowski, H De los Santos, AM Crowell, SB Fordyce, ...
Cell systems 7 (6), 613-626. e5, 2018
892018
A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics
BJM Webb-Robertson, WR Cannon, CS Oehmen, AR Shah, ...
Bioinformatics 24 (13), 1503-1509, 2008
642008
Electrostatic characterization of enzyme complexes: Evaluation of the mechanism of catalysis of dihydrofolate reductase
WR Cannon, BJ Garrison, SJ Benkovic
Journal of the American Chemical Society 119 (10), 2386-2395, 1997
631997
Multiscale modeling in the clinic: drug design and development
CE Clancy, G An, WR Cannon, Y Liu, EE May, P Ortoleva, AS Popel, ...
Annals of biomedical engineering 44, 2591-2610, 2016
592016
Current trends in computational inference from mass spectrometry-based proteomics
BJM Webb-Robertson, WR Cannon
Briefings in bioinformatics 8 (5), 304-317, 2007
532007
A nitrogenase-like enzyme system catalyzes methionine, ethylene, and methane biogenesis
JA North, AB Narrowe, W Xiong, KM Byerly, G Zhao, SJ Young, S Murali, ...
Science 369 (6507), 1094-1098, 2020
522020
A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics
BJM Webb-Robertson, WR Cannon, CS Oehmen, AR Shah, ...
Bioinformatics 26 (13), 1677-1683, 2010
502010
VESPA: software to facilitate genomic annotation of prokaryotic organisms through integration of proteomic and transcriptomic data
ES Peterson, LA McCue, AC Schrimpe-Rutledge, JL Jensen, H Walker, ...
BMC genomics 13 (1), 1-13, 2012
472012
Comparison of probability and likelihood models for peptide identification from tandem mass spectrometry data
WR Cannon, KH Jarman, BJM Webb-Robertson, DJ Baxter, CS Oehmen, ...
Journal of Proteome Research 4 (5), 1687-1698, 2005
402005
Sequence optimization as an alternative to de novo analysis of tandem mass spectrometry data
A Heredia-Langner, WR Cannon, KD Jarman, KH Jarman
Bioinformatics 20 (14), 2296-2304, 2004
402004
pGraph: Efficient parallel construction of large-scale protein sequence homology graphs
C Wu, A Kalyanaraman, WR Cannon
IEEE Transactions on Parallel and Distributed Systems 23 (10), 1923-1933, 2012
392012
A General System for Studying Protein− Protein Interactions in Gram-Negative Bacteria
DA Pelletier, GB Hurst, LJ Foote, PK Lankford, CK McKeown, TY Lu, ...
Journal of proteome research 7 (8), 3319-3328, 2008
352008
Whipple's disease, genomics, and drug therapy
WR Cannon
The Lancet 361 (9372), 1916, 2003
352003
Suvranu De, Salvador Dura-Bernal, Krishna Garikipati, George Karniadakis, William W
M Alber, AB Tepole, WR Cannon
Lytton, Paris Perdikaris, Linda Petzold, and Ellen Kuhl, 2019
332019
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Articles 1–20