متابعة
Alberto Valdeolivas
Alberto Valdeolivas
Roche Pharma Research and Early Development, Basel, Switzerland
بريد إلكتروني تم التحقق منه على roche.com
عنوان
عدد مرات الاقتباسات
عدد مرات الاقتباسات
السنة
The global phosphorylation landscape of SARS-CoV-2 infection
M Bouhaddou, D Memon, B Meyer, KM White, VV Rezelj, MC Marrero, ...
Cell 182 (3), 685-712. e19, 2020
8602020
Assessment of network module identification across complex diseases
S Choobdar, ME Ahsen, J Crawford, M Tomasoni, T Fang, D Lamparter, ...
Nature methods 16 (9), 843-852, 2019
261*2019
Random Walk With Restart On Multiplex And Heterogeneous Biological Networks
A Valdeolivas, L Tichit, C Navarro, S Perrin, G Odelin, N Levy, P Cau, ...
Bioinformatics, 2018
2322018
Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data
D Dimitrov, D Türei, M Garrido-Rodriguez, PL Burmedi, JS Nagai, C Boys, ...
Nature communications 13 (1), 3224, 2022
177*2022
Integrated intra‐and intercellular signaling knowledge for multicellular omics analysis
D Türei, A Valdeolivas, L Gul, N Palacio‐Escat, M Klein, O Ivanova, ...
Molecular systems biology 17 (3), e9923, 2021
1752021
COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms
M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ...
Molecular systems biology 17 (10), e10387, 2021
792021
MultiVERSE: a multiplex and multiplex-heterogeneous network embedding approach
L Pio-Lopez, A Valdeolivas, L Tichit, É Remy, A Baudot
Scientific reports 11 (1), 8794, 2021
332021
Identifying communities from multiplex biological networks by randomized optimization of modularity
G Didier, A Valdeolivas, A Baudot
F1000Research 7, 2018
212018
Integrative proteomic and phosphoproteomic profiling of prostate cell lines
M Katsogiannou, JB Boyer, A Valdeolivas, E Remy, L Calzone, ...
PLOS ONE, 2019
192019
Computational drug repurposing against SARS-CoV-2 reveals plasma membrane cholesterol depletion as key factor of antiviral drug activity
S Barsi, H Papp, A Valdeolivas, DJ Tóth, A Kuczmog, M Madai, ...
PLoS computational biology 18 (4), e1010021, 2022
82022
De wit
M Bouhaddou, D Memon, B Meyer, KM White, VV Rezelj, ...
E, 0
8
Community assessment of methods to deconvolve cellular composition from bulk gene expression
BS White, A de Reyniès, AM Newman, JJ Waterfall, A Lamb, F Petitprez, ...
bioRxiv, 2022.06. 03.494221, 2022
62022
Mapping the epithelial–immune cell interactome upon infection in the gut and the upper airways
M Poletti, A Treveil, L Csabai, L Gul, D Modos, M Madgwick, M Olbei, ...
NPJ Systems Biology and Applications 8 (1), 15, 2022
42022
Contextualizing protein representations using deep learning on protein networks and single-cell data
MM Li, Y Huang, M Sumathipala, MQ Liang, A Valdeolivas, ...
bioRxiv, 2023.07. 18.549602, 2023
32023
Profiling the heterogeneity of colorectal cancer consensus molecular subtypes using spatial transcriptomics
A Valdeolivas, B Amberg, N Giroud, M Richardson, EJC Gálvez, S Badillo, ...
NPJ precision oncology 8 (1), 10, 2024
22024
Charting the heterogeneity of colorectal cancer consensus molecular subtypes using spatial transcriptomics
A Valdeolivas, B Amberg, N Giroud, M Richardson, EJC Gálvez, S Badillo, ...
bioRxiv, 2023.01. 23.525135, 2023
22023
TF activity inference from scRNA-seq data with DoRothEA as regulon resource
CH Holland, A Valdeolivas, J Saez-Rodriguez
Bioconductor, 2020
22020
A network medicine approach to study comorbidities in heart failure with preserved ejection fraction
JD Lanzer, A Valdeolivas, M Pepin, H Hund, J Backs, N Frey, ...
BMC medicine 21 (1), 267, 2023
12023
A versatile and interoperable computational framework for the analysis and modeling of COVID-19 disease mechanisms
A Niarakis, M Ostaszewski, A Mazein, I Kuperstein, M Kutmon, ...
bioRxiv, 2022.12. 17.520865, 2022
12022
Simulated intensity profiles for cylindrical objects in magnification mammography: the effect of the spectrum
KD Palma-Alejandro, A Valdeolivas, T Alieva, M Chevalier, E Guibelalde, ...
Revista Brasileira de Física Médica 5 (3), 233-238, 2011
12011
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مقالات 1–20