Sofia K. Forslund
Sofia K. Forslund
Junior Group Leader, ECRC (joint Max Delbrück Center and Charité University Hospital unit), Berlin
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عنوان
عدد مرات الاقتباسات
عدد مرات الاقتباسات
السنة
The Pfam protein families database
M Punta, PC Coggill, RY Eberhardt, J Mistry, J Tate, C Boursnell, N Pang, ...
Nucleic acids research 40 (D1), D290-D301, 2012
9088*2012
STRING v10: protein–protein interaction networks, integrated over the tree of life
D Szklarczyk, A Franceschini, S Wyder, K Forslund, D Heller, ...
Nucleic acids research 43 (D1), D447-D452, 2015
61852015
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences
J Huerta-Cepas, D Szklarczyk, K Forslund, H Cook, D Heller, MC Walter, ...
Nucleic acids research 44 (D1), D286-D293, 2016
11032016
Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota
K Forslund, F Hildebrand, T Nielsen, G Falony, E Le Chatelier, ...
Nature 528 (7581), 262-266, 2015
9582015
Human gut microbes impact host serum metabolome and insulin sensitivity
HK Pedersen, V Gudmundsdottir, HB Nielsen, T Hyotylainen, T Nielsen, ...
Nature 535 (7612), 376-381, 2016
7182016
InParanoid 7: new algorithms and tools for eukaryotic orthology analysis
G Östlund, T Schmitt, K Forslund, T Köstler, DN Messina, S Roopra, ...
Nucleic acids research 38 (suppl_1), D196-D203, 2010
6402010
Fast genome-wide functional annotation through orthology assignment by eggNOG-mapper
J Huerta-Cepas, K Forslund, LP Coelho, D Szklarczyk, LJ Jensen, ...
Molecular biology and evolution 34 (8), 2115-2122, 2017
5652017
eggNOG v4. 0: nested orthology inference across 3686 organisms
S Powell, K Forslund, D Szklarczyk, K Trachana, A Roth, J Huerta-Cepas, ...
Nucleic acids research 42 (D1), D231-D239, 2014
3942014
Intestinal microbiome is related to lifetime antibiotic use in Finnish pre-school children
K Korpela, A Salonen, LJ Virta, RA Kekkonen, K Forslund, P Bork, ...
Nature communications 7, 10410, 2016
3852016
Salt-responsive gut commensal modulates TH 17 axis and disease
N Wilck, MG Matus, SM Kearney, SW Olesen, K Forslund, ...
Nature 551 (7682), 585-589, 2017
3642017
Country-specific antibiotic use practices impact the human gut resistome
K Forslund, S Sunagawa, JR Kultima, DR Mende, M Arumugam, A Typas, ...
Genome research 23 (7), 1163-1169, 2013
3062013
Towards standards for human fecal sample processing in metagenomic studies
PI Costea, G Zeller, S Sunagawa, E Pelletier, A Alberti, F Levenez, ...
Nature biotechnology 35 (11), 1069-1076, 2017
2692017
The Pfam protein families database
GC Hotz, K Forslund, SR Eddy, ELL Sonnhammer, A Bateman
Nucleic Acids Res 36, D281D288, 2008
2022008
Database issue
RD Finn, J Mistry, J Tate, P Coggill, A Heger, JE Pollington, OL Gavin, ...
Nucleic Acids Res 38, 211-222, 2010
1992010
Coggill
RD Finn, J Tate, J Mistry
P. c., Sammut, SJ, Hotz, HR, Ceric, G., Forslund, K., Eddy, SR, Sonnhammer …, 2008
1772008
Standardized benchmarking in the quest for orthologs
AM Altenhoff, B Boeckmann, S Capella-Gutierrez, DA Dalquen, T DeLuca, ...
Nature methods 13 (5), 425-430, 2016
1332016
Predicting protein function from domain content
K Forslund, ELL Sonnhammer
Bioinformatics 24 (15), 1681-1687, 2008
1022008
Domain tree-based analysis of protein architecture evolution
K Forslund, A Henricson, V Hollich, ELL Sonnhammer
Molecular biology and evolution 25 (2), 254-264, 2008
892008
MOCAT2: a metagenomic assembly, annotation and profiling framework
JR Kultima, LP Coelho, K Forslund, J Huerta-Cepas, SS Li, M Driessen, ...
Bioinformatics 32 (16), 2520-2523, 2016
872016
QNet: an agglomerative method for the construction of phylogenetic networks from weighted quartets
S Grünewald, K Forslund, A Dress, V Moulton
Molecular Biology and Evolution 24 (2), 532-538, 2007
682007
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مقالات 1–20