Andrey Kislyuk
Andrey Kislyuk
DNAnexus; Georgia Tech; UC Berkeley
Verified email at - Homepage
Cited by
Cited by
Origins of the E. coli strain causing an outbreak of hemolytic–uremic syndrome in Germany
DA Rasko, DR Webster, JW Sahl, A Bashir, N Boisen, F Scheutz, ...
New England Journal of Medicine 365 (8), 709-717, 2011
Ebola virus epidemiology, transmission, and evolution during seven months in Sierra Leone
DJ Park, G Dudas, S Wohl, A Goba, SLM Whitmer, KG Andersen, ...
Cell 161 (7), 1516-1526, 2015
Characterization of DNA methyltransferase specificities using single-molecule, real-time DNA sequencing
TA Clark, IA Murray, RD Morgan, AO Kislyuk, KE Spittle, M Boitano, ...
Nucleic acids research 40 (4), e29-e29, 2012
Sensitive and specific single-molecule sequencing of 5-hydroxymethylcytosine
CX Song, TA Clark, XY Lu, A Kislyuk, Q Dai, SW Turner, C He, J Korlach
Nature methods 9 (1), 75-77, 2012
Unsupervised statistical clustering of environmental shotgun sequences
A Kislyuk, S Bhatnagar, J Dushoff, JS Weitz
BMC bioinformatics 10 (1), 1-16, 2009
Multiple whole-genome alignments without a reference organism
I Dubchak, A Poliakov, A Kislyuk, M Brudno
Genome research 19 (4), 682-689, 2009
Modeling kinetic rate variation in third generation DNA sequencing data to detect putative modifications to DNA bases
EE Schadt, O Banerjee, G Fang, Z Feng, WH Wong, X Zhang, A Kislyuk, ...
Genome research 23 (1), 129-141, 2013
Genomic fluidity: an integrative view of gene diversity within microbial populations
AO Kislyuk, B Haegeman, NH Bergman, JS Weitz
BMC genomics 12 (1), 1-10, 2011
Methods for identifying nucleic acid modifications
B Flusberg, J Korlach, J Wegener, TA Clark, I Vilfan, A Kislyuk, S Turner, ...
US Patent 9,175,338, 2015
A computational genomics pipeline for prokaryotic sequencing projects
AO Kislyuk, LS Katz, S Agrawal, MS Hagen, AB Conley, P Jayaraman, ...
Bioinformatics 26 (15), 1819-1826, 2010
IDseq—an open source cloud-based pipeline and analysis service for metagenomic pathogen detection and monitoring
KL Kalantar, T Carvalho, CFA de Bourcy, B Dimitrov, G Dingle, R Egger, ...
Gigascience 9 (10), giaa111, 2020
Conservation patterns in different functional sequence categories of divergent Drosophila species
D Papatsenko, A Kislyuk, M Levine, I Dubchak
Genomics 88 (4), 431-442, 2006
Meningococcus genome informatics platform: a system for analyzing multilocus sequence typing data
LS Katz, CR Bolen, BH Harcourt, S Schmink, X Wang, A Kislyuk, ...
Nucleic acids research 37 (suppl_2), W606-W611, 2009
Frameshift detection in prokaryotic genomic sequences
A Kislyuk, A Lomsadze, AL Lapidus, M Borodovsky
International journal of bioinformatics research and applications 5 (4), 458-477, 2009
Neisseria Base: a comparative genomics database for Neisseria meningitidis
LS Katz, JC Humphrey, AB Conley, V Nelakuditi, AO Kislyuk, S Agrawal, ...
Database 2011, 2011
A computational genomics pipeline for microbial sequencing projects
AO Kislyuk, LS Katz, S Agrawal, MS Hagen, AB Conley, P Jayaraman, ...
Identification of nucleic acid template-linked barcodes comprising nucleic acid modifications
B Flusberg, J Korlach, J Wegener, TA Clark, ID Vilfan, A Kislyuk, S Turner, ...
US Patent 10,294,523, 2019
Algorithm development for next generation sequencing-based metagenome analysis
AO Kislyuk
Georgia Institute of Technology, 2010
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