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Edans Sandes
Edans Sandes
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Title
Cited by
Cited by
Year
CUDAlign: using GPU to accelerate the comparison of megabase genomic sequences
EFO Sandes, ACMA de Melo
Proceedings of the 15th ACM SIGPLAN symposium on Principles and practice of …, 2010
932010
Retrieving smith-waterman alignments with optimizations for megabase biological sequences using GPU
EFO Sandes, ACMA de Melo
IEEE Transactions on Parallel and Distributed Systems 24 (5), 1009-1021, 2012
892012
CUDAlign 4.0: Incremental speculative traceback for exact chromosome-wide alignment in GPU clusters
EF de Oliveira Sandes, G Miranda, X Martorell, E Ayguade, G Teodoro, ...
IEEE Transactions on Parallel and Distributed Systems 27 (10), 2838-2850, 2016
752016
Smith-waterman alignment of huge sequences with gpu in linear space
EFO Sandes, ACMA de Melo
2011 IEEE International Parallel & Distributed Processing Symposium, 1199-1211, 2011
672011
CUDAlign 3.0: Parallel biological sequence comparison in large GPU clusters
EFO Sandes, G Miranda, ACMA de Melo, X Martorell, E Ayguadé
2014 14th IEEE/ACM International Symposium on Cluster, Cloud and Grid …, 2014
412014
Parallel optimal pairwise biological sequence comparison: Algorithms, platforms, and classification
EFDO Sandes, A Boukerche, ACMAD Melo
ACM Computing Surveys (CSUR) 48 (4), 1-36, 2016
332016
MASA: A multiplatform architecture for sequence aligners with block pruning
EF De O. Sandes, G Miranda, X Martorell, E Ayguade, G Teodoro, ...
ACM Transactions on Parallel Computing (TOPC) 2 (4), 1-31, 2016
332016
An exact parallel algorithm to compare very long biological sequences in clusters of workstations
A Boukerche, ACMA de Melo, EFO Sandes, M Ayala-Rincon
Cluster Computing 10, 187-202, 2007
242007
Logical model of relationship for online social networks and performance optimizing of queries: WISE 2012 challenge-T1: performance track scalability winner
EFO De Sandes, L Weigang, ACMA de Melo
Web Information Systems Engineering-WISE 2012: 13th International Conference …, 2012
192012
Querying dynamic communities in online social networks
L Weigang, EFO Sandes, J Zheng, ACMA de Melo, L Uden
Journal of Zhejiang University Science C 15 (2), 81-90, 2014
152014
Bioinformatics of the Paracoccidioides brasiliensis EST Project
MM Brígido, MEMT Walter, AG Oliveira, MK Inoue, DS Anjos, EFO Sandes, ...
FUNPEC-RP, 2005
142005
Formalization of block pruning: Reducing the number of cells computed in exact biological sequence comparison algorithms
EFO Sandes, GLM Teodoro, MEMT Walter, X Martorell, E Ayguade, ...
The Computer Journal 61 (5), 687-713, 2018
112018
de Melo. Cudalign: Using gpu to accelerate the comparison of megabase genomic sequences
EFO Sandes, MA Alba Cristina
Proceedings of the 15th ACM SIGPLAN Symposium on Principles and Practice of …, 0
10
DNA sequences alignment in multi-GPUs: acceleration and energy payoff
J Pérez-Serrano, E Sandes, AC Magalhaes Alves de Melo, M Ujaldón
BMC bioinformatics 19, 161-176, 2018
92018
An agent-based solution for dynamic multi-node wavefront balancing in biological sequence comparison
EFO Sandes, CG Ralha, ACMA de Melo
Expert Systems with Applications 41 (10), 4929-4938, 2014
92014
Parallel fine-grained comparison of long DNA sequences in homogeneous and heterogeneous GPU platforms with pruning
M Figueiredo, JP Navarro, EFO Sandes, G Teodoro, ACMA Melo
IEEE Transactions on Parallel and Distributed Systems 32 (12), 3053-3065, 2021
82021
Algoritmos paralelos exatos e otimizações para alinhamento de sequências biológicas longas em plataformas de alto desempenho
EFO Sandes
82016
Fine-grain parallel megabase sequence comparison with multiple heterogeneous GPUs
EF de O. Sandes, G Miranda, ACMA Melo, X Martorell, E Ayguade
Proceedings of the 19th ACM SIGPLAN symposium on Principles and practice of …, 2014
82014
Comparação paralela de sequências biológicas longas utilizando unidades de processamento gráfico (gpus)
EFO Sandes
72012
Bitmap filter: Speeding up exact set similarity joins with bitwise operations
EFO Sandes, GLM Teodoro, ACMA Melo
Information Systems 88, 101449, 2020
62020
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Articles 1–20