| Targeting TMPRSS2 and Cathepsin B/L together may be synergistic against SARS-CoV-2 infection P Padmanabhan, R Desikan, NM Dixit PLoS computational biology 16 (12), e1008461, 2020 | 125 | 2020 |
| Modeling how antibody responses may determine the efficacy of COVID-19 vaccines P Padmanabhan, R Desikan, NM Dixit Nature Computational Science 2 (2), 123-131, 2022 | 42* | 2022 |
| Preferential presentation of high-affinity immune complexes in germinal centers can explain how passive immunization improves the humoral response AK Garg, R Desikan, NM Dixit Cell Reports 29 (12), 3946-3957. e5, 2019 | 37 | 2019 |
| Capturing the Membrane-Triggered Conformational Transition of an α-Helical Pore-Forming Toxin VVH Giri Rao, R Desikan, KG Ayappa, S Gosavi The Journal of Physical Chemistry B 120 (47), 12064-12078, 2016 | 29 | 2016 |
| Increased B Cell Selection Stringency In Germinal Centers Can Explain Improved COVID-19 Vaccine Efficacies With Low Dose Prime or Delayed Boost AK Garg, S Mittal, P Padmanabhan, R Desikan, NM Dixit Frontiers in immunology 12, 776933, 2021 | 27 | 2021 |
| Assessing the structure and stability of transmembrane oligomeric intermediates of an α-helical toxin R Desikan, PK Maiti, KG Ayappa Langmuir 33 (42), 11496-11510, 2017 | 24 | 2017 |
| Early exposure to broadly neutralizing antibodies may trigger a dynamical switch from progressive disease to lasting control of SHIV infection Rajat Desikan, Rubesh Raja, Narendra M. Dixit PLoS Computational Biology 16 (8), 1-30, 2020 | 22* | 2020 |
| Comparison of coarse-grained (MARTINI) and atomistic molecular dynamics simulations of α and β toxin nanopores in lipid membranes R Desikan, SM Patra, K Sarthak, PK Maiti, KG Ayappa Journal of Chemical Sciences 129 (7), 1017-1030, 2017 | 19 | 2017 |
| Application of quantitative systems pharmacology to guide the optimal dosing of COVID‐19 vaccines M Giorgi, R Desikan, PH van Der Graaf, AM Kierzek CPT: pharmacometrics & systems pharmacology 10 (10), 1130-1133, 2021 | 18 | 2021 |
| Mechanistic Models of COVID-19: Insights into Disease Progression, Vaccines, and Therapeutics R Desikan, P Padmanabhan, AM Kierzek, PH van der Graaf International Journal of Antimicrobial Agents, 106606, 2022 | 17 | 2022 |
| The solvent-exposed c-terminus of the cytolysin A pore-forming toxin directs pore formation and channel function in membranes P Sathyanarayana, R Desikan, KG Ayappa, SS Visweswariah Biochemistry 55 (42), 5952-5961, 2016 | 17 | 2016 |
| Opening of smaller toxin pores by lipid micelle formation R Desikan, P Padmanabhan, KG Ayappa Proceedings of the National Academy of Sciences 117 (10), 5107-5108, 2020 | 12 | 2020 |
| Assessing the extent of the structural and dynamic modulation of membrane lipids due to pore forming toxins: insights from molecular dynamics simulations V Varadarajan, R Desikan, KG Ayappa Soft Matter 16 (20), 4840-4857, 2020 | 12 | 2020 |
| Using multiscale molecular dynamics simulations to obtain insights into pore forming toxin mechanisms R Desikan, A Behera, PK Maiti, GK Ayappa Methods in Enzymology (Chapter Sixteen) 649, 461-502, 2021 | 9 | 2021 |
| Evaluating coarse-grained MARTINI force-fields for capturing the ripple phase of lipid membranes P Sharma, R Desikan, KG Ayappa The Journal of Physical Chemistry B 125 (24), 6359-6732, 2021 | 8 | 2021 |
| Physical ‘strength’of the multi‐protein chain connecting immune cells: Does the weakest link limit antibody affinity maturation? The weakest link in the multi‐protein chain … R Desikan, R Antia, NM Dixit BioEssays 43 (4), 2000159, 2021 | 5 | 2021 |
| Predicting interfacial hot-spot residues that stabilize protein-protein interfaces in oligomeric membrane-toxin pores through hydrogen bonds and salt bridges R Desikan, PK Maiti, KG Ayappa Journal of Biomolecular Structure and Dynamics 39 (1), 20-34, 2020 | 5* | 2020 |
| Vaccine models predict rules for updating vaccines against evolving pathogens such as SARS-CoV-2 and influenza in the context of pre-existing immunity R Desikan, SL Linderman, C Davis, VI Zarnitsyna, H Ahmed, R Antia Frontiers in Immunology 13, 985478, 2022 | 4 | 2022 |
| CYTOCON DB: A versatile database of human cell and molecule concentrations for accelerating model development R Desikan, P Jayachandran CPT: Pharmacometrics & Systems Pharmacology 12 (1), 5, 2023 | 1 | 2023 |
| Modeling suggests that multiple immunizations or infections will reveal the benefits of updating SARS-CoV-2 vaccines R Desikan, SL Linderman, CW Davis, VI Zarnitsyna, HR Ahmed, R Antia bioRxiv, 2022 | 1 | 2022 |
K. Ganapathy AyappaProfessor of Chemical Engineering, Indian Institute of Scienceبريد إلكتروني تم التحقق منه على iisc.ac.in
