| UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs G Grillo, A Turi, F Licciulli, F Mignone, S Liuni, S Banfi, VA Gennarino, ... Nucleic acids research 38 (suppl_1), D75-D80, 2010 | 364 | 2010 |
| REDIportal: a comprehensive database of A-to-I RNA editing events in humans E Picardi, AM D'Erchia, C Lo Giudice, G Pesole Nucleic acids research 45 (D1), D750-D757, 2017 | 339 | 2017 |
| REDItools: high-throughput RNA editing detection made easy E Picardi, G Pesole Bioinformatics 29 (14), 1813-1814, 2013 | 313 | 2013 |
| Bioinformatics approaches for genomics and post genomics applications of next-generation sequencing DS Horner, G Pavesi, T Castrignano, PDO De Meo, S Liuni, M Sammeth, ... Briefings in bioinformatics 11 (2), 181-197, 2010 | 261 | 2010 |
| Next generation sequencing of SARS-CoV-2 genomes: challenges, applications and opportunities M Chiara, AM D’Erchia, C Gissi, C Manzari, A Parisi, N Resta, F Zambelli, ... Briefings in Bioinformatics 22 (2), 616-630, 2021 | 250 | 2021 |
| Profiling RNA editing in human tissues: towards the inosinome Atlas E Picardi, C Manzari, F Mastropasqua, I Aiello, AM D’Erchia, G Pesole Scientific reports 5 (1), 14941, 2015 | 250 | 2015 |
| MToolBox: a highly automated pipeline for heteroplasmy annotation and prioritization analysis of human mitochondrial variants in high-throughput sequencing C Calabrese, D Simone, MA Diroma, M Santorsola, C Gutta, G Gasparre, ... Bioinformatics 30 (21), 3115-3117, 2014 | 224 | 2014 |
| Tissue-specific mtDNA abundance from exome data and its correlation with mitochondrial transcription, mass and respiratory activity AM D'Erchia, A Atlante, G Gadaleta, G Pavesi, M Chiara, C De Virgilio, ... Mitochondrion 20, 13-21, 2015 | 214 | 2015 |
| Large-scale detection and analysis of RNA editing in grape mtDNA by RNA deep-sequencing E Picardi, DS Horner, M Chiara, R Schiavon, G Valle, G Pesole Nucleic acids research 38 (14), 4755-4767, 2010 | 165 | 2010 |
| Reduced levels of protein recoding by A-to-I RNA editing in Alzheimer's disease K Khermesh, AM D'Erchia, M Barak, A Annese, C Wachtel, EY Levanon, ... Rna 22 (2), 290-302, 2016 | 164 | 2016 |
| Whole transcriptome profiling of Late-Onset Alzheimer’s Disease patients provides insights into the molecular changes involved in the disease A Annese, C Manzari, C Lionetti, E Picardi, DS Horner, M Chiara, ... Scientific reports 8 (1), 4282, 2018 | 147 | 2018 |
| SpliceAid-F: a database of human splicing factors and their RNA-binding sites M Giulietti, F Piva, M D’Antonio, P D’Onorio De Meo, D Paoletti, ... Nucleic acids research 41 (D1), D125-D131, 2013 | 142 | 2013 |
| Massive transcriptome sequencing of human spinal cord tissues provides new insights into motor neuron degeneration in ALS AM D’Erchia, A Gallo, C Manzari, S Raho, DS Horner, M Chiara, A Valletti, ... Scientific Reports 7 (1), 1-20, 2017 | 140 | 2017 |
| Phylogenetic comparison of huntingtin homologues reveals the appearance of a primitive polyQ in sea urchin M Tartari, C Gissi, V Lo Sardo, C Zuccato, E Picardi, G Pesole, E Cattaneo Molecular biology and evolution 25 (2), 330-338, 2008 | 136 | 2008 |
| Mitochondrial genomes gleaned from human whole-exome sequencing E Picardi, G Pesole Nature methods 9 (6), 523-524, 2012 | 129 | 2012 |
| Investigating RNA editing in deep transcriptome datasets with REDItools and REDIportal C Lo Giudice, MA Tangaro, G Pesole, E Picardi Nature protocols 15 (3), 1098-1131, 2020 | 123 | 2020 |
| A high resolution A-to-I editing map in the mouse identifies editing events controlled by pre-mRNA splicing K Licht, U Kapoor, F Amman, E Picardi, D Martin, P Bajad, MF Jantsch Genome research 29 (9), 1453-1463, 2019 | 116 | 2019 |
| REDIportal: millions of novel A-to-I RNA editing events from thousands of RNAseq experiments L Mansi, MA Tangaro, C Lo Giudice, T Flati, E Kopel, AA Schaffer, ... Nucleic acids research 49 (D1), D1012-D1019, 2021 | 115 | 2021 |
| Lactobacillus rossiae, a Vitamin B12 Producer, Represents a Metabolically Versatile Species within the Genus Lactobacillus M De Angelis, F Bottacini, B Fosso, P Kelleher, M Calasso, R Di Cagno, ... PloS one 9 (9), e107232, 2014 | 110 | 2014 |
| RAP: RNA-Seq Analysis Pipeline, a new cloud-based NGS web application M D'Antonio, P D'Onorio De Meo, M Pallocca, E Picardi, AM D'Erchia, ... BMC genomics 16, 1-11, 2015 | 86 | 2015 |
Graziano PesoleProfessor of Molecular Biology, Università degli Studi di Bari and National Research CouncilVerified email at uniba.it
