Picardi Ernesto
Picardi Ernesto
Full Professor of Molecular Biology
Verified email at - Homepage
Cited by
Cited by
UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs
G Grillo, A Turi, F Licciulli, F Mignone, S Liuni, S Banfi, VA Gennarino, ...
Nucleic acids research 38 (suppl_1), D75-D80, 2010
REDIportal: a comprehensive database of A-to-I RNA editing events in humans
E Picardi, AM D'Erchia, C Lo Giudice, G Pesole
Nucleic acids research 45 (D1), D750-D757, 2017
REDItools: high-throughput RNA editing detection made easy
E Picardi, G Pesole
Bioinformatics 29 (14), 1813-1814, 2013
Bioinformatics approaches for genomics and post genomics applications of next-generation sequencing
DS Horner, G Pavesi, T Castrignano, PDO De Meo, S Liuni, M Sammeth, ...
Briefings in bioinformatics 11 (2), 181-197, 2010
Profiling RNA editing in human tissues: towards the inosinome Atlas
E Picardi, C Manzari, F Mastropasqua, I Aiello, AM D’Erchia, G Pesole
Scientific reports 5 (1), 14941, 2015
Next generation sequencing of SARS-CoV-2 genomes: challenges, applications and opportunities
M Chiara, AM D’Erchia, C Gissi, C Manzari, A Parisi, N Resta, F Zambelli, ...
Briefings in Bioinformatics 22 (2), 616-630, 2021
MToolBox: a highly automated pipeline for heteroplasmy annotation and prioritization analysis of human mitochondrial variants in high-throughput sequencing
C Calabrese, D Simone, MA Diroma, M Santorsola, C Gutta, G Gasparre, ...
Bioinformatics 30 (21), 3115-3117, 2014
Tissue-specific mtDNA abundance from exome data and its correlation with mitochondrial transcription, mass and respiratory activity
AM D'Erchia, A Atlante, G Gadaleta, G Pavesi, M Chiara, C De Virgilio, ...
Mitochondrion 20, 13-21, 2015
Large-scale detection and analysis of RNA editing in grape mtDNA by RNA deep-sequencing
E Picardi, DS Horner, M Chiara, R Schiavon, G Valle, G Pesole
Nucleic acids research 38 (14), 4755-4767, 2010
Reduced levels of protein recoding by A-to-I RNA editing in Alzheimer's disease
K Khermesh, AM D'Erchia, M Barak, A Annese, C Wachtel, EY Levanon, ...
Rna 22 (2), 290-302, 2016
SpliceAid-F: a database of human splicing factors and their RNA-binding sites
M Giulietti, F Piva, M D’Antonio, P D’Onorio De Meo, D Paoletti, ...
Nucleic acids research 41 (D1), D125-D131, 2013
Phylogenetic comparison of huntingtin homologues reveals the appearance of a primitive polyQ in sea urchin
M Tartari, C Gissi, V Lo Sardo, C Zuccato, E Picardi, G Pesole, E Cattaneo
Molecular biology and evolution 25 (2), 330-338, 2008
Whole transcriptome profiling of Late-Onset Alzheimer’s Disease patients provides insights into the molecular changes involved in the disease
A Annese, C Manzari, C Lionetti, E Picardi, DS Horner, M Chiara, ...
Scientific reports 8 (1), 4282, 2018
Mitochondrial genomes gleaned from human whole-exome sequencing
E Picardi, G Pesole
Nature methods 9 (6), 523-524, 2012
Massive transcriptome sequencing of human spinal cord tissues provides new insights into motor neuron degeneration in ALS
AM D’Erchia, A Gallo, C Manzari, S Raho, DS Horner, M Chiara, A Valletti, ...
Scientific Reports 7 (1), 1-20, 2017
Investigating RNA editing in deep transcriptome datasets with REDItools and REDIportal
C Lo Giudice, MA Tangaro, G Pesole, E Picardi
Nature protocols 15 (3), 1098-1131, 2020
Lactobacillus rossiae, a Vitamin B12 Producer, Represents a Metabolically Versatile Species within the Genus Lactobacillus
M De Angelis, F Bottacini, B Fosso, P Kelleher, M Calasso, R Di Cagno, ...
PloS one 9 (9), e107232, 2014
A high resolution A-to-I editing map in the mouse identifies editing events controlled by pre-mRNA splicing
K Licht, U Kapoor, F Amman, E Picardi, D Martin, P Bajad, MF Jantsch
Genome research 29 (9), 1453-1463, 2019
REDIportal: millions of novel A-to-I RNA editing events from thousands of RNAseq experiments
L Mansi, MA Tangaro, C Lo Giudice, T Flati, E Kopel, AA Schaffer, ...
Nucleic acids research 49 (D1), D1012-D1019, 2021
RAP: RNA-Seq Analysis Pipeline, a new cloud-based NGS web application
M D'Antonio, P D'Onorio De Meo, M Pallocca, E Picardi, AM D'Erchia, ...
BMC genomics 16, 1-11, 2015
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